Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1671 |
Symbol | |
ID | 5091130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1940071 |
End bp | 1941456 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741080 |
Product | outer membrane efflux protein |
Protein accession | YP_001194022 |
Protein GI | 146299431 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA ATAAATATAA TAGTCTTGTT TTTGCCATGC TGTTCGGTTT TGGATTATCG GGCCAGGCAC AAACAAAACA ATGGACTTTA GAAGAATGTG TGAGATACGC ATTAGATAAC AATATCACGA TTAAGCTGTC TGAACTTGAT GTAAAAACAG CAGATATTGA TAAAAGAGGT GCTTTGGGAA GTTATCTGCC AACAGTAAAC GGAAATGCTT CACACTCTTG GAATATTGGT TTGAACGTTA ACCCGGTTAC CAACATTGCA ACTACGCAGA CTACTCAGTA TTCTTCATTA GGAGTAAATG CCAATGTTGA TATTTACAAA GGTCTGCAAA ATCAAAATGC ATATAGAAGA GCTTCACTTG CTATTGTAGC ATCAAAATAT CAATTGTTGA AAATGCAGGA AGATATTTCT CTGAATGTAG CCAACGCTTT CCTGCAGATT TTATCTAACA AAGAAAATTT AAAAGTAAGA ATAGAACAAT TAGCTATTGA CGAAAAACGT CTTGCACGTT CTGAGGAAAT GGTTAATGCC GGAACAATTC CCCGTGGTGA TTTATTTGAT TTAAAAGCTA CTGTTGCAAC AGATAAGCAA AATATCACAG TTTCTGAAAA CAATTTACTG ATTTCAAAAT TGAGTTTAGC GCAGCTTTTA CAATTAAAAG AGTTTGCTGA TTTTGATGTA GTAGATGATA CAAATGCCAA AGATGAAAAC AATATCATGG CACAATCGCC AATTGATATC TACAATAAAG CAAAAGAAAT TAGAACGGAA TTAAAATTAG CACAGACTAA TTTGGAAATT GCCGAGAAAA ATGTTTCAAT TGCAAAAGGA GCTTATCAGC CAACTTTAAG AGGATTCTAT TCTTTCAGCA CAAGTGCAAG TTACAGTGAC CGACTAATTG GAGCTGATGC AGCAGGAAAT CCAATTTACG TTGGTCCAGA TCCCGTTTTA ACTCAGTTTA GTGATAATAA AGGACACAAT TTCGGATTTC AGTTAAGTGT GCCAATCTTT AATGGTTTCT CTGTTAGAAA CAATGTTGAA AGAAACAAAG TAAGTTTGGA AAAATCTAAA ATAGATTTGG AACAAAAAAG CTTAGATTTG CAGCGTAACG TTTATACTGC TTTTACAGAT GCAAAAGGTG CTTTAAATAC CTATGAATCT GCAACAGTTT CTTTAGAAGC AAGACAGCAG GCCTATAATT ATGCTAAAGA AAAGTACGAT GTTGGTTTAA TGAATTCATT TGATTTTACA CAAGCACAAA CTTTGCTTAC AAATGCACAA TCAGACGTTA TTAGAACGAA ATACGATTAC ATGTTTAAAA TTAAAATACT TGAATTCTAT TTCGGAATTC CAATTGTTCC AGTTATTACA AAATAA
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Protein sequence | MKINKYNSLV FAMLFGFGLS GQAQTKQWTL EECVRYALDN NITIKLSELD VKTADIDKRG ALGSYLPTVN GNASHSWNIG LNVNPVTNIA TTQTTQYSSL GVNANVDIYK GLQNQNAYRR ASLAIVASKY QLLKMQEDIS LNVANAFLQI LSNKENLKVR IEQLAIDEKR LARSEEMVNA GTIPRGDLFD LKATVATDKQ NITVSENNLL ISKLSLAQLL QLKEFADFDV VDDTNAKDEN NIMAQSPIDI YNKAKEIRTE LKLAQTNLEI AEKNVSIAKG AYQPTLRGFY SFSTSASYSD RLIGADAAGN PIYVGPDPVL TQFSDNKGHN FGFQLSVPIF NGFSVRNNVE RNKVSLEKSK IDLEQKSLDL QRNVYTAFTD AKGALNTYES ATVSLEARQQ AYNYAKEKYD VGLMNSFDFT QAQTLLTNAQ SDVIRTKYDY MFKIKILEFY FGIPIVPVIT K
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