Gene Fjoh_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1669 
Symbol 
ID5091128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1937571 
End bp1938836 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content36% 
IMG OID644741078 
Producthypothetical protein 
Protein accessionYP_001194020 
Protein GI146299429 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AAGATAATTG GGACGAGATT TTACAGGCCT TAACGGCTAA CCCATTCAGA 
ACTATTCTGA CGGCTTTTGG TGTTTTTTGG GGAATTTTCA TTTTGGTGAT ATTACTTGCA
GCAGGTAATG GTCTGGAAAA TGGTATTAAA AAAGGTTTTG ACGGTATTGC CACAAACACT
ATGTTCATGT GGAGCCAGAC AACATCAAAA GCTTATAAAG GACTTCCTAA AACCCGTCGT
TACGATTTTA GAAACAGTGA TGTTACAGCA TTAAAAGCAG CAATACCAGA TTTATTATAT
GTTTCGCCAA GAAACCAATT GGGGGATTTT AACGGAACAA ATAACGTAGT TCGAGGCACA
AAAACTTCGG CTTTTACGAT TTATGGAGAT TATCCTGAGC TGATTAAACA ACAGCCAATG
GATATTATAA AAGGACGTTT TGTAAATCAG CAGGATATTC TGGAAAAACG AAAAGTTGCC
GTAATTGGGA AAGGAGTTAT CAGTGAATTG TATGGAAAAG AAGAAGAATC TGTCGGCACT
TATATTAAAA TCAACGGTAT AAATTTTATG GTTGTCGGTG TTTACAAATC CAAACAGCAG
GGCGGAAATG CAGAACAGGA ACAAAAAAAT ATTTTTATTC CGTTTACCAC TTTTCAGCAG
GCATTTAATT ATGGTGATAA AGTAGGGTGG ATGGCACTTA CAGCTAGAGA TGAAACTTCG
ATAACAGAAT TGAAACCGAA GATTTTAGAA ATCATAAAAG CACTGCATTC TGTAAATCCT
ACAGATGACA GAGCGGTTGG AAATTTCGAC TTGTACGAAC AGTTCAATAA AGTACAGAGT
TTATTTAATA TTCTAAAAAT CATTGCTTAC TTCGTAGGAA CATTAGTTTT GATTTCTGGA
GTAATTGGAA TTTCAAACAT TATGCTGATT GTAGTTAAAG AGCGTACTAA AGAAATTGGA
ATTAGAAGAG CTTTGGGAGC TACACCAGCA GCAATTAGAG GACAGATTTT AGCAGAATCT
ATTTTCTTAA CAATCATTTC AGGAATGTTA GGAATTGCTG TAGCAACCGG AATTATTGCG
ATTTTAAATA TGGTATTGGA CTCAATGCCG CCAGGAAACG ATACCATGTT TGCCAATCCA
AGTGTTGATT TGGGAGTTGT ATTTGTAGCC TTAATAATAT TAGTAGGATC AGGTTTGCTG
GCAGGATTTA TTCCGGCGCA GACCGCAATT AATGTGAAGC CTGTAGACGC TTTGCGAACA
GAATAA
 
Protein sequence
MFKKDNWDEI LQALTANPFR TILTAFGVFW GIFILVILLA AGNGLENGIK KGFDGIATNT 
MFMWSQTTSK AYKGLPKTRR YDFRNSDVTA LKAAIPDLLY VSPRNQLGDF NGTNNVVRGT
KTSAFTIYGD YPELIKQQPM DIIKGRFVNQ QDILEKRKVA VIGKGVISEL YGKEEESVGT
YIKINGINFM VVGVYKSKQQ GGNAEQEQKN IFIPFTTFQQ AFNYGDKVGW MALTARDETS
ITELKPKILE IIKALHSVNP TDDRAVGNFD LYEQFNKVQS LFNILKIIAY FVGTLVLISG
VIGISNIMLI VVKERTKEIG IRRALGATPA AIRGQILAES IFLTIISGML GIAVATGIIA
ILNMVLDSMP PGNDTMFANP SVDLGVVFVA LIILVGSGLL AGFIPAQTAI NVKPVDALRT
E