Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1669 |
Symbol | |
ID | 5091128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1937571 |
End bp | 1938836 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644741078 |
Product | hypothetical protein |
Protein accession | YP_001194020 |
Protein GI | 146299429 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AAGATAATTG GGACGAGATT TTACAGGCCT TAACGGCTAA CCCATTCAGA ACTATTCTGA CGGCTTTTGG TGTTTTTTGG GGAATTTTCA TTTTGGTGAT ATTACTTGCA GCAGGTAATG GTCTGGAAAA TGGTATTAAA AAAGGTTTTG ACGGTATTGC CACAAACACT ATGTTCATGT GGAGCCAGAC AACATCAAAA GCTTATAAAG GACTTCCTAA AACCCGTCGT TACGATTTTA GAAACAGTGA TGTTACAGCA TTAAAAGCAG CAATACCAGA TTTATTATAT GTTTCGCCAA GAAACCAATT GGGGGATTTT AACGGAACAA ATAACGTAGT TCGAGGCACA AAAACTTCGG CTTTTACGAT TTATGGAGAT TATCCTGAGC TGATTAAACA ACAGCCAATG GATATTATAA AAGGACGTTT TGTAAATCAG CAGGATATTC TGGAAAAACG AAAAGTTGCC GTAATTGGGA AAGGAGTTAT CAGTGAATTG TATGGAAAAG AAGAAGAATC TGTCGGCACT TATATTAAAA TCAACGGTAT AAATTTTATG GTTGTCGGTG TTTACAAATC CAAACAGCAG GGCGGAAATG CAGAACAGGA ACAAAAAAAT ATTTTTATTC CGTTTACCAC TTTTCAGCAG GCATTTAATT ATGGTGATAA AGTAGGGTGG ATGGCACTTA CAGCTAGAGA TGAAACTTCG ATAACAGAAT TGAAACCGAA GATTTTAGAA ATCATAAAAG CACTGCATTC TGTAAATCCT ACAGATGACA GAGCGGTTGG AAATTTCGAC TTGTACGAAC AGTTCAATAA AGTACAGAGT TTATTTAATA TTCTAAAAAT CATTGCTTAC TTCGTAGGAA CATTAGTTTT GATTTCTGGA GTAATTGGAA TTTCAAACAT TATGCTGATT GTAGTTAAAG AGCGTACTAA AGAAATTGGA ATTAGAAGAG CTTTGGGAGC TACACCAGCA GCAATTAGAG GACAGATTTT AGCAGAATCT ATTTTCTTAA CAATCATTTC AGGAATGTTA GGAATTGCTG TAGCAACCGG AATTATTGCG ATTTTAAATA TGGTATTGGA CTCAATGCCG CCAGGAAACG ATACCATGTT TGCCAATCCA AGTGTTGATT TGGGAGTTGT ATTTGTAGCC TTAATAATAT TAGTAGGATC AGGTTTGCTG GCAGGATTTA TTCCGGCGCA GACCGCAATT AATGTGAAGC CTGTAGACGC TTTGCGAACA GAATAA
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Protein sequence | MFKKDNWDEI LQALTANPFR TILTAFGVFW GIFILVILLA AGNGLENGIK KGFDGIATNT MFMWSQTTSK AYKGLPKTRR YDFRNSDVTA LKAAIPDLLY VSPRNQLGDF NGTNNVVRGT KTSAFTIYGD YPELIKQQPM DIIKGRFVNQ QDILEKRKVA VIGKGVISEL YGKEEESVGT YIKINGINFM VVGVYKSKQQ GGNAEQEQKN IFIPFTTFQQ AFNYGDKVGW MALTARDETS ITELKPKILE IIKALHSVNP TDDRAVGNFD LYEQFNKVQS LFNILKIIAY FVGTLVLISG VIGISNIMLI VVKERTKEIG IRRALGATPA AIRGQILAES IFLTIISGML GIAVATGIIA ILNMVLDSMP PGNDTMFANP SVDLGVVFVA LIILVGSGLL AGFIPAQTAI NVKPVDALRT E
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