| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1465 |
|---|
| Symbol | |
|---|
| ID | 5092471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1680574 |
|---|
| End bp | 1681302 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644740872 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001193816 |
|---|
| Protein GI | 146299225 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGTA AAAACCAAAT AAAACTTATA TCAAGTTTAC ATCAAAAAAA GCAGCGTTTT
GCAAATCAAT TATTTTTTGC CGAAGGAGTA AAAGTAATTC AGGAATTGCT GCAATCCAAT
TTTGAATTAG AACATTTATA CACTACGTTA AATGATTTTG AAGAAGTTCA ATCTTCAAAA
CGAACTCTTA TTAATGAACA AGAACTAAAA AAAATAAGTG CTTTAACAAC TCCAAATTCT
TGTCTGGCAG TTTTTAAAAT GCCTGTCGAA AATCAAATTA TAAATTCTGG TTTAATTCTG
GCTTTAGACG ACATTCGTGA TCCGGGAAAT CTGGGCACAA TAATGCGTCT CTGCGACTGG
TTCGGGATTA AGCAAATTGT TTGTTCTAAA GAAACAGTCG ATATTTATAA TCCAAAAGTG
GTTCAGGCCA CAATGGGATC TATTGCCAGA GTAAACGTAA ATTATGTTGA TCTTAAAGCT
TTTTTAAGTC AGACAAAACT TCCTGTTTTT GGAACATTTA TGGATGGAGA TACAATTTAT
CAATCTAATT TACCTCAAAA TGGAATCATT ATTATGGGTA ATGAAGCCAA TGGTATCTCG
GCAGAAATTG AAAAAATAGT AACCACCCGG CTTACAATTC CAAGATTTGG AGAGCTGCAA
AAAACCGAAA GTTTAAATGT AGCTACTGCA ACAGCAATTA TTCTTAGTGA ATTTAAACGA
AATAGTTAA
|
|---|
| Protein sequence | MVSKNQIKLI SSLHQKKQRF ANQLFFAEGV KVIQELLQSN FELEHLYTTL NDFEEVQSSK
RTLINEQELK KISALTTPNS CLAVFKMPVE NQIINSGLIL ALDDIRDPGN LGTIMRLCDW
FGIKQIVCSK ETVDIYNPKV VQATMGSIAR VNVNYVDLKA FLSQTKLPVF GTFMDGDTIY
QSNLPQNGII IMGNEANGIS AEIEKIVTTR LTIPRFGELQ KTESLNVATA TAIILSEFKR
NS
|
|---|
| |