| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1408 |
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| Symbol | |
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| ID | 5093191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1610261 |
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| End bp | 1613134 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644740814 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001193759 |
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| Protein GI | 146299168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTTTACTATC AATATTTTTA TTGATGGCAG TAACAGTTTT TGCCCAGCAG
CAAACCGTTA CTTATTCAAT AAACCCTCCC ACTTTTGAAG ATACTACGCC AATTACAATA
ACAATTAATG GTACCAGTAT TAATGAAAGT ACGTGGGGAG TTACAGGTAA TGCATTGTAT
CTTTGGTCAT GGTCTTATGA TGTAAATGAT ACCAACCAAA TGGATTCTCC GTCTAACGGA
TCATGGACTT CTTCAAATGA AGCTGCAAAG TTTACCTATA ATGCAGGTAC TGATACTTAT
ACTAAAACTT TTACACCGTC TGTATATTTT GGACGAAATG GAATTGGCAG AATAGGATTT
TTGGTTAAAG CAAAAGACGG AAGCGGCAGC AAACAATCTC AGGATATTGT TGTCGAAGTT
GGATCTTTTC AGGTAAACCT AACTTCACCT GTAGAAAATA GCGCTTCAAT TATAGCGTCT
GGTTCCAATT TTAATATTGC AGCCACAAAT ACAAACGGAG CGGCAAGCTA TTCGTTAAAA
GCAAATGGAA CAGTAATAAA TACCAATGCA AGTACTGCAA GTTATTCTTA TTCTCATATA
AATGTTACTA ATAATCAAAC GTATGAATTG AGTGTAACTC AGGGATCGAC TACAATTGTA
AAAAAGTTTT CAGTTGTGGT AAATCCAAAC ACAGTTTCTC AAACAATGCC TGCAGGATTA
GTTGATGGAA TTAATTATAA TTCCAATGAT ACTTCAAAAG CAACATTGGT TCTTGATGCT
CCTTTAAAAG ATTTTGTTTA CGTTGCCGGA AGTTTCAATA ACTGGCAGCC AACTTCGGCG
TATGCCATGA AAAAAGATCC TGTTTCGGGA AAATTTTGGT TAGAATTAAC CGGATTGGTT
TCGGGAGTAA ATAATACCTA TCAGTATTGG GTTGTAGATG CTTCACCTCT TACCGGTTCT
CCATCTTTAG TAAAAACGGC CGACCCTTAT TCTACTTTGG TTTTGTCTCC GTATGATGAT
CCGTGGATTC CGGCATCTTC TTATCCAAAT TTACCAGCTT ATCCAGCAGG ACAGCAGTTT
GAAGTTACGG TTCTAAAAAC TGGTCAGACT CCTTATAATT GGCAGGTAAC TAATTTTACA
AAGCCCGAAA AAGAAAAACT GGTTATTTAT GAAGTTTTGG TTCGAGATTT TGATGCAGCA
AGAAATTACC AAAGTATAAT TGACAAAATC GATTATTTCA AAAACCTTAA AATAAACGCT
ATCGAATTAA TGCCGGTAAT GGAATTTGAA GGTAATGAAA GCTGGGGTTA TAATACTTCT
TTTCACATGG CTTTGGACAA GTTTTATGGA ACATCGGATA AATTAAAAGA ACTAATAGAT
GTATGTCATC AAAACGGAAT TGCCGTTATT CTTGATGTGG CTTTAAATCA TGCTTTCGGA
AGAAATCCAA TGGTTAGAAT GTGGATGAAC GATCCTGACG GTGATGGTTT TGGTTCACCA
ACAGCCGAAA ATCCATACTT TAATACAGTT GCAAAACATA CATTTAGTGT TGGAGAAGAC
TTTAATCATC AATCAACAAG AACACAATAT TATGTAGAGC GTGTAATTAA GCAATGGATT
CAGGAATATA AAATTGATGG TTTTAGATGG GATTTAACAA AAGGATTTAC ACAGGCTTGT
ACAGCCTCAG ATCAATCTTG TACAAATGCA TACCAGCAAG ACAGGGTAGA TATTTTAAAG
AAATATGCTG ATTATTCATG GAGTCTGGAT CCAACGCATT ATACCATTTT TGAGCATTTA
GGAACTGAAG CCGAAGAAAA ACAATGGGCC GATTACAGAG TAACAGAAAC TCCAAGTAAA
GGAGTTATGA TGTGGGGTAA AATGACAGAT CCTTACAATC AATTGTCTAT GGGGTATGCT
TCTGAAAGTA ATATTTCGAA AATGTCAAGT GCCAATCGTG GTTTTGCTGC AAACCGTTTA
ATAGGTTATG CCGAAAGTCA TGACGAAGAA CGTTTGATGT ATAAAAATGT GCAATACGGA
GCTTCAAACA GTGCTTATAA TGTAAAAACA TTAAATACCG CTTTATCCAG AATGTCGGCA
ATTGGAGCAG TTTCATTATT AGTTCCAGGA CCAAAAATGA TTTGGCACTT TGGAGAACTG
GGCTGGGAGA GTTCAATTTT TACCTGTAAT GATAATTCTG TAAATACAGA TTCAGATAGT
ACAGGCGGAG ATTGTAAACT AGATACCAAA CCACAGCCTC AGTGGGTAAA TAACTGGTTA
GGAAATTCAA ACCGTAATAA AATTTACAAC GATTGGGCTA AGATGATTAC ACTAAAAAAG
GCAGAACCTG TTTTTTTAGG AACTTCAACA ATTCCAAATT CTAATTCGCT TACAGTAAAC
ATTAAAATAA CCAATGCAGG TTTAACTTCG GCACAATTAA AAGACGTTTT GATTTTAGCC
AATTTTGACG TTACAGCGCA AAACGTTTCG ACAGGTTTTC CGTATGCAGG AACTTGGTAC
AATTTAATGG ATAATACTAC AATAAATGTT ACTGATGTAA ATGCTCCGAT AAATTTACCT
GCAGGTGAAT ATAGAATTTA TGGAAACAAA ACTGCCAATT TAGCTATCGA AGATTTTGAA
AAAGGAAGCA CGGTGAATTT ATATCCAAAT CCGGTTTCAA ATCATTTCAC TTTAAGTACC
GCAGTTTCAA AAGTTCAGAT TTATTCAGTT TCAGGACAAT TTGTAAAAAG CTTTGCTTCA
AACGGAAATG TTGATTTTCA ATTTGGCGTA AGTGAATTAC AAACAGGTTT GTATATCGTA
AAAGCTTCAG ATGAAAATGG TAAAATACAG GTAATGAAGT TTATTAAAAA ATAA
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| Protein sequence | MKKTLLSIFL LMAVTVFAQQ QTVTYSINPP TFEDTTPITI TINGTSINES TWGVTGNALY
LWSWSYDVND TNQMDSPSNG SWTSSNEAAK FTYNAGTDTY TKTFTPSVYF GRNGIGRIGF
LVKAKDGSGS KQSQDIVVEV GSFQVNLTSP VENSASIIAS GSNFNIAATN TNGAASYSLK
ANGTVINTNA STASYSYSHI NVTNNQTYEL SVTQGSTTIV KKFSVVVNPN TVSQTMPAGL
VDGINYNSND TSKATLVLDA PLKDFVYVAG SFNNWQPTSA YAMKKDPVSG KFWLELTGLV
SGVNNTYQYW VVDASPLTGS PSLVKTADPY STLVLSPYDD PWIPASSYPN LPAYPAGQQF
EVTVLKTGQT PYNWQVTNFT KPEKEKLVIY EVLVRDFDAA RNYQSIIDKI DYFKNLKINA
IELMPVMEFE GNESWGYNTS FHMALDKFYG TSDKLKELID VCHQNGIAVI LDVALNHAFG
RNPMVRMWMN DPDGDGFGSP TAENPYFNTV AKHTFSVGED FNHQSTRTQY YVERVIKQWI
QEYKIDGFRW DLTKGFTQAC TASDQSCTNA YQQDRVDILK KYADYSWSLD PTHYTIFEHL
GTEAEEKQWA DYRVTETPSK GVMMWGKMTD PYNQLSMGYA SESNISKMSS ANRGFAANRL
IGYAESHDEE RLMYKNVQYG ASNSAYNVKT LNTALSRMSA IGAVSLLVPG PKMIWHFGEL
GWESSIFTCN DNSVNTDSDS TGGDCKLDTK PQPQWVNNWL GNSNRNKIYN DWAKMITLKK
AEPVFLGTST IPNSNSLTVN IKITNAGLTS AQLKDVLILA NFDVTAQNVS TGFPYAGTWY
NLMDNTTINV TDVNAPINLP AGEYRIYGNK TANLAIEDFE KGSTVNLYPN PVSNHFTLST
AVSKVQIYSV SGQFVKSFAS NGNVDFQFGV SELQTGLYIV KASDENGKIQ VMKFIKK
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