| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1280 |
|---|
| Symbol | |
|---|
| ID | 5093984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1463048 |
|---|
| End bp | 1464076 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644740682 |
|---|
| Product | L-asparaginase, type I |
|---|
| Protein accession | YP_001193631 |
|---|
| Protein GI | 146299040 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.223178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTA AAGCAAAAAT ATTATTGATT TATACCGGAG GAACCATCGG TATGAGCAAA
GACTTTGAAA CTGGAGCGCT TAAAGCCTTC AATTTTGGTA AATTAATTCA GAAAATTCCA
GAAATTAAAC AATTGGACTG CGAAATCGAA TCGATTTCAT TTGAACATCC AATTGATTCT
TCGAATATGA ATCCTCAAAT GTGGACTAAA ATTGCCACAA TTATTGAGAA AAATTACGCT
TCTTACGACG GATTTGTTGT TCTTCACGGA TCAGATACGA TGTCGTATTC GGCTTCGGCA
TTGAGTTTTA TGCTCGAGAA TTTAGCAAAA CCAGTTGTAT TTACAGGTTC GCAATTGCCA
ATTGGAGACT TGCGTACCGA TGCAAAAGAA AACCTGATTA CAGCCATTCA GATTGCATCA
CTTTTAGAAG ACGGAAAACC GGTTATTACA GAAGTCTGTT TGTATTTTGA ATACAAATTG
TACCGTGGAA ACCGAACTTC AAAAGTAAAT GCGGAGCATT TTAGAGCTTT TACAGCGCCA
AATTATCCGG AATTGGTAGA ATCTGGAGTT CATCTAAAAT TGAACAAACA TTTATTTCTT
CCTGTAAATA AGGATGCAAA ATTAATCGTT CATAAAAACT TAGACAACCA CGTAGCCATT
ATTAAAATGT TTCCGGGAAT GAGCGAAATT GTTTTGGCTT CAATTCTGGC AACTAAAGGT
TTAAGAGGAA TTATTCTGGA AACTTACGGT TCAGGAAATG CTCCAACCGA AGATTGGTTT
TTAAATTTAA TTGAAAAAGC CATTAAATCC GGAATGCATA TCGTAAACGT AACACAATGT
TCTGGCGGAA GCGTGAATAT GGGACAGTAT GAAACCAGTA CTGCTTTAAA ATCTTTAGGT
GTTATTTCCG GAAAAGACAT TACTACAGAA GCCGCAATTA CAAAATTGAT GTATTTACTG
GGTCATAATA TTCCTCAAAA CGAGTTTAAA GATATTTTTG AAACGGCACT TCGCGGGGAA
ATATCTTAA
|
|---|
| Protein sequence | MSSKAKILLI YTGGTIGMSK DFETGALKAF NFGKLIQKIP EIKQLDCEIE SISFEHPIDS
SNMNPQMWTK IATIIEKNYA SYDGFVVLHG SDTMSYSASA LSFMLENLAK PVVFTGSQLP
IGDLRTDAKE NLITAIQIAS LLEDGKPVIT EVCLYFEYKL YRGNRTSKVN AEHFRAFTAP
NYPELVESGV HLKLNKHLFL PVNKDAKLIV HKNLDNHVAI IKMFPGMSEI VLASILATKG
LRGIILETYG SGNAPTEDWF LNLIEKAIKS GMHIVNVTQC SGGSVNMGQY ETSTALKSLG
VISGKDITTE AAITKLMYLL GHNIPQNEFK DIFETALRGE IS
|
|---|
| |