Gene Fjoh_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1106 
Symbol 
ID5090184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1247059 
End bp1248294 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content38% 
IMG OID644740506 
Productbeta-ketoacyl synthase 
Protein accessionYP_001193458 
Protein GI146298867 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA GAGTTGTAAT TACTGGAATG GGAATTTATT CTTGTATCGG AACTTCTTTA 
GATGAAGTAA AAGAATCGCT GTATAATGGA AAATCAGGGA TAAAATTTGA TTCTGACCGA
AAAGAATTTG GTTTTCAATC AGCCTTAACG GGAATGGTTC CTAAAGCTGA TTTAAAAAAT
TTACTGACCC GCAGACAGCG TATGAGTATT GGTGAAGAAA CCGAGTATGC TTATATGGCA
ACTATCGAAG CATTGAAAAA TGCTAATATC GATGATGCTT TTTTTGAAAC TCGCGAAGTG
GGAATCATGT ACGGAAATGA CAGTGTTTCT AAAGCTATCA TTGATGCTAC AGATATTGTC
CGTGAGAAAA AAGACACTGC TCTTATTGGT TCTGGTGCGA TTTTTAAATC GATGAATTCT
ACCGTTACCA TGAATCTTTC AACGATTTTT AAACTTCGTG GTATTAATTT AACCGTTAGT
GCCGCTTGTG CAAGTGGTTC ACATTCTATT GGATTGGCTT ATTTTTTAAT TAAAAGTGGT
TTTCAGGATA TTATTATAAC CGGCGGAGCG CAGGAAATAA ACAAATATGC TATGAGCAGT
TTTGACGGAC TGGGTGTTTT CTCTAACCGT GAAGGCGATC CAGAAAAAGC GTCAAGACCT
TTTGATGCCG AACGCGACGG ATTGATTCCT AGTGGCGGCG GTGCAACTTT AATTCTCGAA
AGTTACGAAT CTGCTATTGC GCGCGGTGCC AATATTATCG CCGAAGTTTC AGGTTACGGA
TTTTCATCAA ACGGCGGACA TATTTCGACA CCAAATGTCG AAGGTCCTTC TACAGCAATG
CAGAGAGCAT TAGATGATGC TAAACTAAAA GCATCAGATA TTGAGTATAT AAATGCACAC
GCAACTTCAA CTCCGGTTGG TGATGCAAAC GAAGCCAAGG CGATTTTTGA AGTTTTTGGT
GAGAAAAATC CTTACGTAAG TTCTACAAAA TCAATGACAG GACACGAATG CTGGATGGCT
GGAGCAAGTG AAATTATTTA CTCTATCATC ATGATGCAGA ACGATTTCAT TGCCCCGAAC
ATCAATTTAG AAAATCCAGA CGAAGATGCT TCAAAATTAA ATTTAGTTAA AACTACGTTA
AACAAAAAAT TTGACATATT TTTGTCCAAT TCTTTCGGTT TCGGAGGAAC CAACTCTGCG
TTGGTGGTTA AAAAGTTTAA ATTGAACGAT GAATAA
 
Protein sequence
MNKRVVITGM GIYSCIGTSL DEVKESLYNG KSGIKFDSDR KEFGFQSALT GMVPKADLKN 
LLTRRQRMSI GEETEYAYMA TIEALKNANI DDAFFETREV GIMYGNDSVS KAIIDATDIV
REKKDTALIG SGAIFKSMNS TVTMNLSTIF KLRGINLTVS AACASGSHSI GLAYFLIKSG
FQDIIITGGA QEINKYAMSS FDGLGVFSNR EGDPEKASRP FDAERDGLIP SGGGATLILE
SYESAIARGA NIIAEVSGYG FSSNGGHIST PNVEGPSTAM QRALDDAKLK ASDIEYINAH
ATSTPVGDAN EAKAIFEVFG EKNPYVSSTK SMTGHECWMA GASEIIYSII MMQNDFIAPN
INLENPDEDA SKLNLVKTTL NKKFDIFLSN SFGFGGTNSA LVVKKFKLND E