Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0699 |
Symbol | |
ID | 5090733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 766834 |
End bp | 769992 |
Gene Length | 3159 bp |
Protein Length | 1052 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644740100 |
Product | UvrD/REP helicase |
Protein accession | YP_001193053 |
Protein GI | 146298462 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGTC CGTCTTTTTC CATTTATGAT GCTTCTGCAG GATCAGGAAA GACCTATACT TTGGTTAAAG AATATCTGAA AATTATTCTT TCTTCTCCAA AAAACGATGC TTATCGTAAT ATTCTGGCCA TAACTTTTAC CAACAAAGCA GTTCATGAAA TGAAAAGCCG TATTGTTGGG AGTTTATCTG AATTTGCCAA AGAAGAGCCT TCTGCGAAAG CGGTTGATTT AATGGAAGAT TTATCTCGGG ATACCGGGCT TTCAATTATT CAGTTAAAAG TAAAATCTCA AAGTATCATT AAGCATTTAA TTCACAATTA TGCTGCTTTT GATATTTCTA CTATCGATAA ATTTACTCAC AAAGTCATTC GGGCTTTTGC GCATGATCTG AATCTGCCAA TGACTTTTGA GGTTACTTTG GATACTGAAA ATTTATTGGT TGAAGCTGTT GATGCTATTA TTGCTCAAGC TGGTCAGGAC GAAACGCTGA CTAAATTGCT GATCGATTTT ACGATGGAAA AAACCGATGA TGATAAAAGC TGGGACATTT CGAGAGAAAT TCTCGAAACC GGACGTTTGG TTTTGAATGA AAATAATCGA AATGAAATTC TTCATTTTAA TGATAAGACA ATCGAGGAGT TTGTCGAAAT TAAAAAGAAA ATGCTGGCCT TGTGCAAAGA ACTCGAATCT GAAAACGAAC AATTTGCAAT TGAAGCACTT TCTTTAATCG AGAAAAACGG AATCGATCTA AAATCTTTTT CAAGAGGGAC CTTCCCAAAT CATCTTGAAA GTATTCGTGA CGGGAAATTT AATCCACGCA ATAAAACCTT TCATGAATTT GATGATATTG CAATTAATAA AACGGCTAAG GATAAATCTT TAATCGAAAA TATAATTCCG GATTTACTTC AAATACTGAG TAAAATCTAT AAAAATTTTG AAAAAAGAGA TTTTTATAAA GCCTTCCTAA AAAATATAAC ACCGCTTTCA TTACTGAATA CAGTCAGCAA TGAATTGGCG AAGATTCAAT CAGAACAAAA TGTTTTGTCT ATTTCAGAAT TCAATGCGAT TATTCACCGC GAAATTCAGA ATCAGCCTGC GCCTTTTATT TATGAGCGTT TAGGTGAAAG ATACCGTCAT TTTTTTATTG ATGAATTTCA GGATACTTCC GAAATGCAAT GGCAGAATCT AATTCCGCTT ATTGATAACT CGCTTTCAGG TCTGGATGAT TTAGGGAATA AAGGAACCTT AATGATTGTT GGAGATCCAA AACAATCTAT TTATCGCTGG AGAGGCGGGA AAGCGGAGCA GTTTATTGAG CTGAGCAAAG ATGTAAACCC GTTCAATAAT CCTGATAAGG CAATTAAACA TTTAAATACA AATTATAGAA GTTACAGCGA GGTAATTGAA TTTAACAATG CTTTCTTTAA ATTAATTTCT TCCGAGTTTT CAAATGAAGA TTATAAAGAT TTGTATGAAA ATCACAGCTT TCAAAATACA AATTCAAAAA AAGGCGGTTA TGTAAATATT TCGTTTCTTC CGATAATCGA AAAATCAGAT TTTGCAGATG AAGAAGAAGT AATTGAAAAA TCAGATTTAT ATGTTTTAGC GACCTTAAAT ACAATTCAAA AAGTAATTCG AGAAGGTTTT GAATATAAAG ATATTGTAAT TTTAACCCGC AAAAGAGATC AGGGAATTGC AATTGCAAAT TATTTAACAG AACAGAATAT TCCGCTTTTA TCTTCGGAAA CATTAATGAT TAAAAATGCA ACTGAAGTTC GTTTGATTAT AAATCTTCTG AGATATTTAA ATAACAATGC AGATTTAGAA TCGAAAGCCA ATTTTCTTCA TTTTTTAGCT GAAAATAAAG AAATTGAATT GCCTGTTCAT GATTTTATTG CACAGGGAAT GGCTCAAAAA TTTGAAGAAG ATTTTGAAAA ATGGCTTTTA ACTTTTGATG TTTCTCTTTC TTTTGAAAAT GTTCGAAAAA AATCACTTTA CGAAGCCGTC GAAATAATCA TTTCTAAGTT TGTTCTGCCA TCAGAAGGAA ATGCTTATGT TCAGTTTTTC TTGGATATCG TTCTGGAAAG AGATATTCGA AATCAAGCTG GTGTGGCAGA TTTTTTAAGT TTTTGGGATA AGAATTCTGA GAAATTCAGT ATTCCTTCTC CAGAAGGAAA TAATGCGGTT CGAATTATGA CAATTCACAA GTCCAAAGGT TTGGAGTTTC CTGTTGTTAT TATGCCTTTT GCAGAAGAGG ATTATAATCG AAAACCAAAA GATAAATTAT GGCTCGATAC CGAAGAAACA GATTTGGGAG TTCCAAAAGC TTTGATTGAT AACAGCAGTG CTGTTGAAGG ATTTGGAGAA AGTGCTTCGA TAGTTTTTAA TTTGAAAAAA CAAGAAGAGC TGTTGGATAA TATTAATGTT TTGTATGTTG CATTAACACG TGCCGAAGAA CAATTATATG TTATTTCGCA ATCTTTAAAA GAAAGAAAAG ACGGTGAGAT GCCCAATAAT ATGGCATCTT ATTTTATTAA ATATTTGATG CATAAAGGAA TTTATGATTC TGAGAAGTTA GAATACGAAT TTGGAAACAA AATAAGACTT TCAAAATCTG AAAAAACAGT TGATTTAGTA AAAACGATTC CAATTGTAAA AGAAGTTTTA AATCCCAAAA ATATAAAAAT TGCACAGCGA GAAGCGTTAA TGTGGGGAAC ACATCAGCAA GAAGCGATTT CGTATGGAAA TATTGTGCAT GAAATCCTGG CTTTCGTTAA AGATAAATCA GATGTTGATC TTGCGGTAGT AAAAGCATTA GAAAATGGTT TGATAACAAT AGATCAATCT GAAATGGTTT TAAAAACGCT CAAAGAAATT GTAAATCATC CTGAATTAAG TATTTGTTTT GATGGGAATC ATAAAGTTTT AAATGAGCAG ACTATTGTGC AAAAAGCTGG TAAAATTCTA AAACCAGACA GGGTAGTGCT GACAAACAAT AAAGAGGCTT ATCTCTTGGA TTATAAAACT GGAGCATTTA ATTCAAAATA TCAAAAGCAA ATTCAAGAAT ATCAGGATGC AATTGAAGAT TTAGGATACA AAGTGTTAAA AAGAGCTTTG ATATATATAG GGTCGGAAAT TGAAGTGGTA AATTTGTGA
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Protein sequence | MQSPSFSIYD ASAGSGKTYT LVKEYLKIIL SSPKNDAYRN ILAITFTNKA VHEMKSRIVG SLSEFAKEEP SAKAVDLMED LSRDTGLSII QLKVKSQSII KHLIHNYAAF DISTIDKFTH KVIRAFAHDL NLPMTFEVTL DTENLLVEAV DAIIAQAGQD ETLTKLLIDF TMEKTDDDKS WDISREILET GRLVLNENNR NEILHFNDKT IEEFVEIKKK MLALCKELES ENEQFAIEAL SLIEKNGIDL KSFSRGTFPN HLESIRDGKF NPRNKTFHEF DDIAINKTAK DKSLIENIIP DLLQILSKIY KNFEKRDFYK AFLKNITPLS LLNTVSNELA KIQSEQNVLS ISEFNAIIHR EIQNQPAPFI YERLGERYRH FFIDEFQDTS EMQWQNLIPL IDNSLSGLDD LGNKGTLMIV GDPKQSIYRW RGGKAEQFIE LSKDVNPFNN PDKAIKHLNT NYRSYSEVIE FNNAFFKLIS SEFSNEDYKD LYENHSFQNT NSKKGGYVNI SFLPIIEKSD FADEEEVIEK SDLYVLATLN TIQKVIREGF EYKDIVILTR KRDQGIAIAN YLTEQNIPLL SSETLMIKNA TEVRLIINLL RYLNNNADLE SKANFLHFLA ENKEIELPVH DFIAQGMAQK FEEDFEKWLL TFDVSLSFEN VRKKSLYEAV EIIISKFVLP SEGNAYVQFF LDIVLERDIR NQAGVADFLS FWDKNSEKFS IPSPEGNNAV RIMTIHKSKG LEFPVVIMPF AEEDYNRKPK DKLWLDTEET DLGVPKALID NSSAVEGFGE SASIVFNLKK QEELLDNINV LYVALTRAEE QLYVISQSLK ERKDGEMPNN MASYFIKYLM HKGIYDSEKL EYEFGNKIRL SKSEKTVDLV KTIPIVKEVL NPKNIKIAQR EALMWGTHQQ EAISYGNIVH EILAFVKDKS DVDLAVVKAL ENGLITIDQS EMVLKTLKEI VNHPELSICF DGNHKVLNEQ TIVQKAGKIL KPDRVVLTNN KEAYLLDYKT GAFNSKYQKQ IQEYQDAIED LGYKVLKRAL IYIGSEIEVV NL
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