Gene Fjoh_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0530 
Symbol 
ID5089476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp560458 
End bp560889 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content40% 
IMG OID644739929 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001192884 
Protein GI146298293 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA AAAAATTAAA TAAATACGAT AAAGCTTATC TGCGAATTGC TAAAGAATGG 
AGCCTTTTAT CGTATTGTAA GCGTAAGCAG GTTGGCGCGA TTATCGTAAA AGACAGAATG
ATTATTTCTG ACGGATACAA CGGAACGCCT TCCGGATTTG AAAATTGCTG CGAAGACGAA
GACGGCTTAA CGCGCTGGGA TGTTTTGCAC GCCGAGGCAA ATGCAATTCT AAAAGTTGCC
AGATCGACAC AATCGTGTGA AGGAGCAACC CTCTATATCA CGCTTTCGCC TTGCAAAGAA
TGCAGTAAAC TAATACATCA GTCAGGAATA AAAAGAGTGG TGTATAAAGA CGGATATCGT
GATGATTCCG GAATTCAATT TTTAATAAAA GCGGGTGTCG AAGTCGAACA TATTCCTGTT
TTAGAAGAAT AA
 
Protein sequence
MEVKKLNKYD KAYLRIAKEW SLLSYCKRKQ VGAIIVKDRM IISDGYNGTP SGFENCCEDE 
DGLTRWDVLH AEANAILKVA RSTQSCEGAT LYITLSPCKE CSKLIHQSGI KRVVYKDGYR
DDSGIQFLIK AGVEVEHIPV LEE