Gene Fjoh_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0483 
Symbol 
ID5094154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp506610 
End bp507731 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content32% 
IMG OID644739882 
Producthypothetical protein 
Protein accessionYP_001192837 
Protein GI146298246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTG TTTCTGTAGC AACCGGAATT GGGTTGCAGC AAAAAATACG CGAAAAAGTT 
TCAGCGTTCA ACGGTCAGAT TATTATTTCG AATTACGATA ATAACAATTC TGAAATAACT
TTAATTCCCA TTTCAAAAAA ACAAGACTTT TATCCCAAAT TTAAATCTGT TCCAGAGGTA
AGCCATATTC AGGCAATCGC TAGTAAAGCA GGAATAATTA GAACAGAAAA TGCTTTTGAA
GGAATTGTTT TTAAAGGCGT AGGAGCAGAT TACAATTGGA ACAATATAAA AGAGTATTTA
GTAGAAGGCA GACTGCCGGA TTTTTCTAAA TCACTAAATG AAGAAGTTAT TATATCAAGA
TTTCTTGCAG ACAGGCTTAA TTTAAAACTA GGAGACAGTT TTAATACCTT TTTTGTAAAA
GAAGAACAAG GAAAACTGCC TAATATCCGC AGATTTAAAA TTGCAGGAAT TTTTAGTTCG
GGATTTCAGG ATTTTGATGC ATCATATATA ATAGGAGATA TTCGACACAT TCAGAGAATT
AATAAATGGA ATGCAGATCA AATTGGAGCT TTTGAAGTTT TTGTAAAAGA CTTTACTCAA
ATTAAAGAAA CAGGAAATCA TATTTACGAA CAAATTCCTT CAAATCTTGA CACAAAAACA
ATAACAGAAA AGTACAATTA TATTTTTGAC TGGCTTCAGC TCTTTGATTT TAATATAGTT
GTTATTCTTG GAATAATGAT TTTAGTAGCT ACAATTAATA TGGTTGTCGC TTTGTTAGTT
CTTATTTTAG AGCGGACACA AATGATAGGA ATTTTAAAAG CCCTGGGAGC TGATAACTGG
ACGGTTCGAA AAGTTTTTTT ATACAATGCA TTCTATCTAA TTGTTCGAGG TTTGTTTTGG
GGGAATTTAA TTGGAATTTC ATTGCTCTTA ATCCAGCAGC AATTTGGGAT TGTTCATCTT
AATCCCGAAA ACTACTATGT GAACCAGGCA CCGGTATATT TAAACTGGAC ATATATAGTA
TTGTTGAACT TGCTGACTAT AACTGTATGT TTCCTCGTAT TATTAATTCC TTCTTATTTA
ATAACAAAAA TCTCTCCTGT AAAAGCAATT CGCTTCGATT GA
 
Protein sequence
MMIVSVATGI GLQQKIREKV SAFNGQIIIS NYDNNNSEIT LIPISKKQDF YPKFKSVPEV 
SHIQAIASKA GIIRTENAFE GIVFKGVGAD YNWNNIKEYL VEGRLPDFSK SLNEEVIISR
FLADRLNLKL GDSFNTFFVK EEQGKLPNIR RFKIAGIFSS GFQDFDASYI IGDIRHIQRI
NKWNADQIGA FEVFVKDFTQ IKETGNHIYE QIPSNLDTKT ITEKYNYIFD WLQLFDFNIV
VILGIMILVA TINMVVALLV LILERTQMIG ILKALGADNW TVRKVFLYNA FYLIVRGLFW
GNLIGISLLL IQQQFGIVHL NPENYYVNQA PVYLNWTYIV LLNLLTITVC FLVLLIPSYL
ITKISPVKAI RFD