Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0397 |
Symbol | rplC |
ID | 5093280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 406875 |
End bp | 407492 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644739791 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001192752 |
Protein GI | 146298161 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGGT TAATTGGTAA AAAAATCGGC ATGACTAGTA TTTTCGACGA AAACGGGAAA AACATTCCTT GTACAGTAAT CGAAGCTGGA CCATGTGTTG TTACCCAAGT CAGAACCAAC GAGGTTGACG GGTATGAAGC GTTGCAACTT GGTTTCGATG ACAAAAACGA GAAACATTCT ACTAAAGCTG CTTTAGGGCA CTTTAAAAAA GCTGGAACTG TTGCTAAGAA AAAAGTCGTT GAATTCCAAG ATTTTGCAAC TGAGCAAAAA TTAGGAGATC TTATTGATGT TTCTATTTTT GAAGAAGGAG AGTTTGTAGA CGTGCAAGGT GTGTCTAAAG GTAAAGGTTT CCAAGGTGTT GTTAAACGTC ACGGTTTTGG TGGGGTTGGG CAAGCTACAC ATGGTCAGCA CAACCGTTTA AGAGCGCCAG GTTCTGTAGG AGCATCTTCT TATCCGTCTA GAGTATTCAA AGGAATGCGT ATGGCTGGAA GAATGGGAGG AGATAATGTA AAAGTTCAAA ACCTTAGAGT TTTAAAAGTA GTTGCTGAAA AGAATCTACT TGTTGTTAAA GGATGTATTC CAGGACACAA AAACTCTTAC GTAATCATTC AGAAGTAA
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Protein sequence | MSGLIGKKIG MTSIFDENGK NIPCTVIEAG PCVVTQVRTN EVDGYEALQL GFDDKNEKHS TKAALGHFKK AGTVAKKKVV EFQDFATEQK LGDLIDVSIF EEGEFVDVQG VSKGKGFQGV VKRHGFGGVG QATHGQHNRL RAPGSVGASS YPSRVFKGMR MAGRMGGDNV KVQNLRVLKV VAEKNLLVVK GCIPGHKNSY VIIQK
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