Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0361 |
Symbol | |
ID | 5089562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 384842 |
End bp | 385633 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739755 |
Product | polysaccharide export protein |
Protein accession | YP_001192716 |
Protein GI | 146298125 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAAA ATAGCTTTTA TATACTTTTA ATAGTTAGTA TATTTTTTAC TTCATGTATC CCTGTAAAAG ATCTGATATA TTTACAAGAT AAAAATAATT CGGGAGAGCA AAACAATAAT ATAGCTCAGG TAGAATCGAA ACCTTACAGG CTTCAGGTTA ATGATGTCTT GAGTGTTACT ATTAAAGCTA TTGACCCTAA GTTTGTATCT ATTTTTAGTC CCACCGAAAG TGGAGCTGAT GGCAAATCTG AATCTGCTTT ATATTTTGAT GGATTTACGG TTGATGATCA TGGAAATATA AGAATGCCAA TCTTGGGTGA GATAAATGTT ATAGGGTATA CTTTAGAAGA AGTACGTCTT AAAATTGAAA AGCAGCTTCT TGAAGAATAT TTTAAAAGTG AAGCTAATAT TTTTGTTACA GTTAAACTTG CAGGGTTTAG ATATACAATC AATGGCGAAG TTGGCAGCAC TGGTACAAAA ACTTTGTTTC AGGAACGCGT AAATGTATTG GAAGCGATTG CTAATGCAGG AGATATTAAA ACAGTTGGAG ATAGAAAATC TGTTGTTATC ATTCGCCAGA GTCCCACCGG AGTTCAGATG AATTCTATTG ATTTAACAGA TGTTAATGTT ATGAAGTCTC CATATTATTA TTTACAGCCA AATGATTACA TTTATGTTAA GCCTTTACGA CAAAAAACTT GGGGTACAGG AGAGACAGGT TTACAATCTA TTGGTACAAT CATAACTTTA CTTTCTTTGG CAACAACTGT TTATTTTATT GTAAAAAACT AA
|
Protein sequence | MTKNSFYILL IVSIFFTSCI PVKDLIYLQD KNNSGEQNNN IAQVESKPYR LQVNDVLSVT IKAIDPKFVS IFSPTESGAD GKSESALYFD GFTVDDHGNI RMPILGEINV IGYTLEEVRL KIEKQLLEEY FKSEANIFVT VKLAGFRYTI NGEVGSTGTK TLFQERVNVL EAIANAGDIK TVGDRKSVVI IRQSPTGVQM NSIDLTDVNV MKSPYYYLQP NDYIYVKPLR QKTWGTGETG LQSIGTIITL LSLATTVYFI VKN
|
| |