Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0350 |
Symbol | |
ID | 5089551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 370684 |
End bp | 371310 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739744 |
Product | HAD family hydrolase |
Protein accession | YP_001192705 |
Protein GI | 146298114 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.373549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA AAGCTGTAAT TTTTGATATG GATGGTGTTT TAATAGATGC ACGTGATTGG CACTATGAAT CCCTCAATAA AGCGCTTGGG CTATTTGGTA CTGAGATAAC CAGGTATGAT CACCTAGTAA CTTTTGATGG ATTACCTACC AAGAAAAAAT TAGAAATGTT AAGTTTGGAA GGAGGACTTC CAACTAAACT TCATGATTTT ATCAATGATT TGAAACAAGA ATATACATGG GAAATAGTTT ATACTACTTG TAAGCCAATT TTTCATCATA GATATGCTTT GTCAAAACTT AAAAATGACG GGTATCTTTT GTCAGTATGT TCAAATTCTG TTCGTAAGAC AATTGAATTA ATGATGGAAA GATCGGGTTT GATAGAATAC TTAGATTTCT TTTTGTCAAA CCAAGATGTT GAAAAAGGAA AACCTGATCC AGAAATTTAC AGCAAGGCTA TAAATAGGTT GGGGTTTCAA CCTGATGAAT GCTTGATAAT AGAAGATAAT CAAAATGGCA TAAAAGCAGC GCTAGCTTCT GGAGCTCATT TGTTGAAAGT TGAAAATCCA GATGATGTAA CCTATCAGAA TATTATAAAA CGTATCAAAG AAATTGAAAA TGCTTAA
|
Protein sequence | MKIKAVIFDM DGVLIDARDW HYESLNKALG LFGTEITRYD HLVTFDGLPT KKKLEMLSLE GGLPTKLHDF INDLKQEYTW EIVYTTCKPI FHHRYALSKL KNDGYLLSVC SNSVRKTIEL MMERSGLIEY LDFFLSNQDV EKGKPDPEIY SKAINRLGFQ PDECLIIEDN QNGIKAALAS GAHLLKVENP DDVTYQNIIK RIKEIENA
|
| |