Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0169 |
Symbol | |
ID | 5094497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 174676 |
End bp | 175569 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739561 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001192525 |
Protein GI | 146297934 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAAC TAAAACTTGA ACACGTTACA CAATACAATC AGTTAAAAGG TGTTGGAACT CAGCATCCTT TAGTAAGTAT TTTTGATAAT TCTAATAGTA ATCCGTTACC CAATAATACC CGTCTGCATT TTGGTTTTTA TGCTATATTT TTAAAAGCCG GAAATTGCGG CGAATTAAAA TACGGTCGTA ATAATTATGA CTATGATGAC GGCACAATGG TTTTTGTTGC TCCCGGTCAG GTTCTGGAAG TAAGCAATAC TGATAATTAT AAATCTACAG GCTTAACATT GCTTTTTCAT CCTGATTTTA TAAAAGGAAC TGCCTTGTTT AAAAATATAA ATCAATATTC GTTCTTTTCT TATGACTCGC ACGAAGCGCT CCATTTGTCT TTAAAAGAAC AGGAAATTAT AAAAGATTTA TTCAACAAAT TAGAATACGA GTTAAGCCAG TCTATTGACA AACACAGCAA AAATATTATC AGCAATACTA TAGAACTGCT TTTAAATCAT TGTGTACGTT TTTATGACAG ACAATTCATT ACCCGTGAAA ACATCAATTC TGATATTTTA TCAAAATTTG AAAACTGCTT AAATGATTAT TTCCATTCTC AAAATGCACA AGATTCTGGA CTTCCTTCTG TTGGATATTT TGCAGATCTT TTACATCTTT CACCCAATTA TTTTGGAGAT TTAATAAAAA AAGAAACTGG GAAATCGGCT CAGGAACACA TTCAGTTAAA ATTAATAAAT CTGGCAAAAG AACGAATTTT TGATACCGAA AAATCAGTCA GCCAGATTGC TTTTGAATTA GGATTTAAAT ATCCGCAGCA CTTTAACCGC ATGTTTAAAA AGAATACCGG TTATACACCA ATCGAATATA GAAACCTAAA CTAA
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Protein sequence | MDQLKLEHVT QYNQLKGVGT QHPLVSIFDN SNSNPLPNNT RLHFGFYAIF LKAGNCGELK YGRNNYDYDD GTMVFVAPGQ VLEVSNTDNY KSTGLTLLFH PDFIKGTALF KNINQYSFFS YDSHEALHLS LKEQEIIKDL FNKLEYELSQ SIDKHSKNII SNTIELLLNH CVRFYDRQFI TRENINSDIL SKFENCLNDY FHSQNAQDSG LPSVGYFADL LHLSPNYFGD LIKKETGKSA QEHIQLKLIN LAKERIFDTE KSVSQIAFEL GFKYPQHFNR MFKKNTGYTP IEYRNLN
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