Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0083 |
Symbol | |
ID | 5090850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 88214 |
End bp | 89356 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739475 |
Product | periplasmic binding protein |
Protein accession | YP_001192440 |
Protein GI | 146297849 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.622653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACATT TATTCCCTAA ATTGATTTTT ATTTCTTCTT TTTTTATCCT CTTCGGATGT AAGAAGAACG AAACGAGCGA AGTAGCAAAA ACTGATGCTG CAAAAAACAG TATCGAATAT GCATCTGGAC TTTCGATCGT AAAATATGAC GATTATTCAG TAGTTACGGT TTCAAATCCC TGGCCTAATG CGAATAAGGA TTTCAAATAT GTTTTAAAAG AAAAAGAAGC AAAAGTTCCG GATAGTTTAC AGGCTTATAC TTCAATTCAG ATTCCGTTAG AATCTGTTGT AGTAACTTCA ACCACTAATA TTCCTTTTTT AGAAATGCTG GAAGTAGAAA ACAAGCTTGT TGGTTTTCCG CATACCGATT ATATTTCGTC TGAAAAAACC AGAGCTTTAA TTGATAAAGG TTCTGTGAAA AACGTTGGAC AGAATGAAAA ATTAAATATC GAACAGTTAA TAGAATTATC ACCAGATTTA ATTGTGACTT TTGGTGTTGA TAATAACAAC CCAATGCTGG ATAATTTAAA GAAAAGCGGA TTGAATATTT TAATTCAGGG CGACTGGATG GAACAGTCAC CGCTTGGAAA AGCAGAGTGG ATAAAACTTT ATGGAGCTTT GTTTGGTAAA GAAGAAAAAG CAAAAGAATT GTTTGATAAA ATTGTTCAAA GTTACGAGCA GGCAAAAAAA CTGGCGGCAG AAAAAGAAGT AAACTCTACC GTTTTATACG GATCTATGTA TGAAGATGTT TGGTACGTTG CCAAAGGAAA CAGCTGGGTT GCTGAGTTTA TGAAAGATGC TCATGCCAAT TATTTATGGG CAGATTTAAA AGGAACAGGA AGTGAAGGTT TATCTTTTGA AAAAGTTCTG GATAAAGCAA AAACGGCGAG TGTATGGATT GCTTCAGGTT CGTTTAAAAG TCTGGATGAA CTGCAAAAGG CAAATCCGCA TTATGGAGAA TTTGATGCTT TTAAAAATAA AAATGTATAT AGTTTTGAAG GAAAACTGGG AGCGACAGGA GGAACGGTTT ATTATGAACT GGCACCAAGC CGTCCGGATT TAGTTTTAAA AGATTATATC AAAATTTTTC ACCCTGATTT ACTGCCAAGC TACGAATTTA CTTTTGCATC AAAACTGAAT TAA
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Protein sequence | MRHLFPKLIF ISSFFILFGC KKNETSEVAK TDAAKNSIEY ASGLSIVKYD DYSVVTVSNP WPNANKDFKY VLKEKEAKVP DSLQAYTSIQ IPLESVVVTS TTNIPFLEML EVENKLVGFP HTDYISSEKT RALIDKGSVK NVGQNEKLNI EQLIELSPDL IVTFGVDNNN PMLDNLKKSG LNILIQGDWM EQSPLGKAEW IKLYGALFGK EEKAKELFDK IVQSYEQAKK LAAEKEVNST VLYGSMYEDV WYVAKGNSWV AEFMKDAHAN YLWADLKGTG SEGLSFEKVL DKAKTASVWI ASGSFKSLDE LQKANPHYGE FDAFKNKNVY SFEGKLGATG GTVYYELAPS RPDLVLKDYI KIFHPDLLPS YEFTFASKLN
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