Gene Fjoh_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0083 
Symbol 
ID5090850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp88214 
End bp89356 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content34% 
IMG OID644739475 
Productperiplasmic binding protein 
Protein accessionYP_001192440 
Protein GI146297849 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.622653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATT TATTCCCTAA ATTGATTTTT ATTTCTTCTT TTTTTATCCT CTTCGGATGT 
AAGAAGAACG AAACGAGCGA AGTAGCAAAA ACTGATGCTG CAAAAAACAG TATCGAATAT
GCATCTGGAC TTTCGATCGT AAAATATGAC GATTATTCAG TAGTTACGGT TTCAAATCCC
TGGCCTAATG CGAATAAGGA TTTCAAATAT GTTTTAAAAG AAAAAGAAGC AAAAGTTCCG
GATAGTTTAC AGGCTTATAC TTCAATTCAG ATTCCGTTAG AATCTGTTGT AGTAACTTCA
ACCACTAATA TTCCTTTTTT AGAAATGCTG GAAGTAGAAA ACAAGCTTGT TGGTTTTCCG
CATACCGATT ATATTTCGTC TGAAAAAACC AGAGCTTTAA TTGATAAAGG TTCTGTGAAA
AACGTTGGAC AGAATGAAAA ATTAAATATC GAACAGTTAA TAGAATTATC ACCAGATTTA
ATTGTGACTT TTGGTGTTGA TAATAACAAC CCAATGCTGG ATAATTTAAA GAAAAGCGGA
TTGAATATTT TAATTCAGGG CGACTGGATG GAACAGTCAC CGCTTGGAAA AGCAGAGTGG
ATAAAACTTT ATGGAGCTTT GTTTGGTAAA GAAGAAAAAG CAAAAGAATT GTTTGATAAA
ATTGTTCAAA GTTACGAGCA GGCAAAAAAA CTGGCGGCAG AAAAAGAAGT AAACTCTACC
GTTTTATACG GATCTATGTA TGAAGATGTT TGGTACGTTG CCAAAGGAAA CAGCTGGGTT
GCTGAGTTTA TGAAAGATGC TCATGCCAAT TATTTATGGG CAGATTTAAA AGGAACAGGA
AGTGAAGGTT TATCTTTTGA AAAAGTTCTG GATAAAGCAA AAACGGCGAG TGTATGGATT
GCTTCAGGTT CGTTTAAAAG TCTGGATGAA CTGCAAAAGG CAAATCCGCA TTATGGAGAA
TTTGATGCTT TTAAAAATAA AAATGTATAT AGTTTTGAAG GAAAACTGGG AGCGACAGGA
GGAACGGTTT ATTATGAACT GGCACCAAGC CGTCCGGATT TAGTTTTAAA AGATTATATC
AAAATTTTTC ACCCTGATTT ACTGCCAAGC TACGAATTTA CTTTTGCATC AAAACTGAAT
TAA
 
Protein sequence
MRHLFPKLIF ISSFFILFGC KKNETSEVAK TDAAKNSIEY ASGLSIVKYD DYSVVTVSNP 
WPNANKDFKY VLKEKEAKVP DSLQAYTSIQ IPLESVVVTS TTNIPFLEML EVENKLVGFP
HTDYISSEKT RALIDKGSVK NVGQNEKLNI EQLIELSPDL IVTFGVDNNN PMLDNLKKSG
LNILIQGDWM EQSPLGKAEW IKLYGALFGK EEKAKELFDK IVQSYEQAKK LAAEKEVNST
VLYGSMYEDV WYVAKGNSWV AEFMKDAHAN YLWADLKGTG SEGLSFEKVL DKAKTASVWI
ASGSFKSLDE LQKANPHYGE FDAFKNKNVY SFEGKLGATG GTVYYELAPS RPDLVLKDYI
KIFHPDLLPS YEFTFASKLN