| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0078 |
|---|
| Symbol | |
|---|
| ID | 5090845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 84535 |
|---|
| End bp | 84990 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644739470 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001192435 |
|---|
| Protein GI | 146297844 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACG TAGTTCTTGT AGAACCAGAA ATACCAAACA ATACCGGAAA TATTGGAAGA
TTGTGCGTGG GTACAGAAAG CCGGCTTCAT TTAATTCATC CTTTTGGATT TGTAATTAAT
GATAAAAACC TTAAACGTTC GGGTTTGGAT TATTGGGTGC ATCTTGATGT AACCGAATAT
CAGAATGTTG AAGAATGGAT CCAGCAAATT CCAGATCACT CCAGAGTATT TTTGATGAGT
TCACATTCTG AAAAATCATA TTTAGAAAAT GAATTTCAGG ACGGCGACTG GCTGGTTTTT
GGAAAAGAAA GCGTTGGTTT GAGTGCAGCA TTTATGGCTC GATTTGAAAA TCATTTAACA
ATCCCAATGT CACCGCTGAT TCGTTCTTTT AATATTGCAA ATTCAGTTGC TTTTGTAGTT
GGTGAAGCTA AAAGACAGAT TGGATTGAAA AAATAA
|
|---|
| Protein sequence | MLNVVLVEPE IPNNTGNIGR LCVGTESRLH LIHPFGFVIN DKNLKRSGLD YWVHLDVTEY
QNVEEWIQQI PDHSRVFLMS SHSEKSYLEN EFQDGDWLVF GKESVGLSAA FMARFENHLT
IPMSPLIRSF NIANSVAFVV GEAKRQIGLK K
|
|---|
| |