Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0010 |
Symbol | |
ID | 5091166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 7564 |
End bp | 8445 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644739393 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001192367 |
Protein GI | 146297776 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTACA CAGATAAAAT GTTACGAGAC GACGCTTTAA AAGGTAAAGT TATTGTAGTT ACTGGCGGCG GAAGCGGTTT AGGTAAAGCA ATGACCAAAT ATTTTTTAGA ATTGGGCGCT CAGGTTGCGA TTACTTCCAG AGACTTAGAA AAGCTGAAAA CAACAGCTGC AGAACTCGAA AGCGAAACTG GCGGAAAATG TTTACCTCTT CAATGTGATG TTCGCCATTA TGAAGAAGTA GAAAATATGC TTCAGGAAAC TTTAAAAATT TTCGGAAAAG TGGATGTTCT TTTAAACAAT GCAGCAGGAA ATTTCATTTC GCCAACAGAA CGTTTATCTG CAAATGCATT TGATACTGTT ATCGATATTG TTCTTAAAGG TTCTAAAAAC TGTACACTGG CTTTTGGAAA ACACTGGATC GACACAAAAC AAACATCGGC AACGATTTTA AATATTGTAA CAACTTATGC GTGGACTGGT TCTGCTTATG TGGTGCCAAG TGCAACGGCT AAAGCTGGGG TTTTAGCCAT GACAAGAAGC CTTGCTGTAG AATGGGCTAA ATACGGAATC CGTTCTAATG CAATCGCTCC GGGACCATTC CCAACAAAAG GAGCATGGGA TAGATTATTG CCGGGAGATC TTTCTGAAAA GTTTGATATG GCAAAAAAAG TGCCGTTGAA ACGTGTAGGA GATCATCAGG AATTAGCCAA TTTAGCAGCT TATTTAGTTT CTGATTTTTC AGCTTATGTA AATGGTGATG TTATTACAAT CGACGGAGGC GAATGGTTAA AAGGTGCCGG ACAATTTAAT TTATTAGAAG CAATTCCAGA GGAACTTTGG GATCAGCTTG AAATGATGAT AAAAGCAAAA AAGAATAAAT AA
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Protein sequence | MSYTDKMLRD DALKGKVIVV TGGGSGLGKA MTKYFLELGA QVAITSRDLE KLKTTAAELE SETGGKCLPL QCDVRHYEEV ENMLQETLKI FGKVDVLLNN AAGNFISPTE RLSANAFDTV IDIVLKGSKN CTLAFGKHWI DTKQTSATIL NIVTTYAWTG SAYVVPSATA KAGVLAMTRS LAVEWAKYGI RSNAIAPGPF PTKGAWDRLL PGDLSEKFDM AKKVPLKRVG DHQELANLAA YLVSDFSAYV NGDVITIDGG EWLKGAGQFN LLEAIPEELW DQLEMMIKAK KNK
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