Gene Fjoh_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0004 
Symbol 
ID5091160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp2582 
End bp2986 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content36% 
IMG OID644739387 
Productthioesterase superfamily protein 
Protein accessionYP_001192361 
Protein GI146297770 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATCAAACGCA AGTGCGTGTT CGTTACTCCG AAACTGACCA AATGGGAGTT 
GTTTATCACG GAAATTATGT GCCTTATTTT GAGATTGGAC GCGTGGAATG GCTTAGAAAT 
AAAGGGATTT CGTATAAAAG CATGGAAGAA AGCGGTATTG GGCTTCCAAT TGTTTCCATG 
CAGATCAACT ATAAAAAATC TGCTCGTTAC GATGAGCTTT TAACTATTCA TACAACATTC 
AAAAGCCAGT CATCTGTTAA GATCGAATTT GACTGCGAAA TTTATAACGA AGCAAATGAG 
TTATTAACAA CGGCAGTGTT TATTTTAGTA TTTATTTCGT TAAAAACGGG CCGCCCAACG 
GCACCTCCAG ATTATATTTT AGAATTGTTT AAAACGATGG AATAA
 
Protein sequence
MKKHQTQVRV RYSETDQMGV VYHGNYVPYF EIGRVEWLRN KGISYKSMEE SGIGLPIVSM 
QINYKKSARY DELLTIHTTF KSQSSVKIEF DCEIYNEANE LLTTAVFILV FISLKTGRPT 
APPDYILELF KTME