Gene Ent638_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3317 
Symbol 
ID5111831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3620439 
End bp3621095 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID640493524 
Producthemolysin III family channel protein 
Protein accessionYP_001178031 
Protein GI146312957 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAC CAATCGTTGC ACAGGGATAT TCACTGGCTG AGGAAATAGC CAACAGCATT 
AGCCATGGTA TTGGCCTCCT TTTTGGTATT GTCGGTTTGG TGCTTCTGCT GGTGCAGGCG
GTTGATACAA ACGCCAATGC GCTGGCGATC ACCAGCTATA GCCTGTATGG CGGGAGTATG
ATTCTGCTCT TTCTCGCCTC AACGCTGTAT CACGCCATTC CGCACCAGCG GGCCAAAATC
TGGCTAAAGA AATTTGATCA CTGCGCTATC TATCTCCTGA TAGCCGGAAC CTATACGCCA
TTTTTGCTGG TGGGGTTAAA TTCGCCTTTA TCACGCGGCC TGATGATCGT CATCTGGGGT
CTGGCGCTGC TCGGTATCTT GTTTAAGCTT ACGATTGCGC ACCGGTTTAA AGTGCTTTCG
CTGGTGACGT ATCTGACGAT GGGTTGGCTG TCGCTGATCG TGATATATCA ACTGGCGACA
AAGCTGGACG CGGGTGGTGT GACGTTGCTG GCGTTGGGAG GGATTATCTA TTCACTCGGC
GTGATTTTTT ACGTCTGTAA ACGTATTCCG TATAACCATG CTATCTGGCA TGGCTTTGTG
TTGGGCGGGA GCGTGTGCCA TTTCCTGGCG ATTTATTTGT ACGTTGCGCA GGTGTAG
 
Protein sequence
MSKPIVAQGY SLAEEIANSI SHGIGLLFGI VGLVLLLVQA VDTNANALAI TSYSLYGGSM 
ILLFLASTLY HAIPHQRAKI WLKKFDHCAI YLLIAGTYTP FLLVGLNSPL SRGLMIVIWG
LALLGILFKL TIAHRFKVLS LVTYLTMGWL SLIVIYQLAT KLDAGGVTLL ALGGIIYSLG
VIFYVCKRIP YNHAIWHGFV LGGSVCHFLA IYLYVAQV