| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_2681 |
|---|
| Symbol | |
|---|
| ID | 5114648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 2885427 |
|---|
| End bp | 2888780 |
|---|
| Gene Length | 3354 bp |
|---|
| Protein Length | 1117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640492869 |
|---|
| Product | putative sensor protein |
|---|
| Protein accession | YP_001177398 |
|---|
| Protein GI | 146312324 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3447] Predicted integral membrane sensor domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.968854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCC TGGATAAAGC GGTAATGAAT AAACAATACC AGCGCGTTTT GGTTACTACC
CCACATCCAG TCCTACGGCT TGTCAGTCTT GGTCTGGTAA CGTTCATATT TACCCTTTTC
TCGCTCGAAC TGACTCGATT CGGAACGTTG CTGGCACCGT TGTGGTTCCC GACCTCAATC
ATGATGGTCG CGTTTTACCG CCATGCCGGA AAAATGTGGC CGGGTATTGC CCTCGCCTGT
TCCCTGGGGA ATATTCTCGC TACAGGATTA TTGTTCAGCT GGGATTCGCT TAACGTCTTG
TACCCCACGA TAAATGCTAT CGAAGCATTT GTGGGCGCGC TGCTGCTGCG TAAAATGTTG
CCCTGGTATA ACCCCTTAAA AAATCTTGGC GACTGGATAC GTCTGGCGAT CGGCAGCGCC
GCGATCCCGC CGTTGCTGGG TGGTGTGCTG GCCTGGCTTT TAGTTCCCAG CGAGGAGCCA
CTGCGTAACT TTCTGGTGTG GGTATTATCG GAATCTATTG GTGCGCTGGC GCTTGTCCCG
CTAGGACTGC TTTTCAAACC GCACTATTTA CTGCGCCATC GCAACCCAAA ACTGCTGCTT
GAAACGCTCG TCACCATGGC GGTCACGCTG GTGCTGTGTT GGGTTGCGAT TACATTCCTT
CCGTGGCCGT TTACCTGCGT CATCGTATTG CTGATGTGGA GTGCCGTACG CCTCCCGCGG
CTCGAAGCGT TCCTTGTTTT TCTGGTCACG GTAATGATGG TGTCATTGAT GATGGCGACC
AATCCGACCC CCATGACCAC TCAAAATAGC GGTGTCATGC TTAACGCACC GTGGTTGCCG
TTCCTGATGA TGCTGCTTCC CGCGAACGTC ATGACTATGG TGATGTACGC CTTTCGTGCC
GAACGTAAGC ACATCACCGA AAGTGAAGAA CGTTTTCGCA ATGCCATGGA ATATTCGGCG
ATTGGTATGG CGCTGGTCGG GATTGATGGC CAGTGGCTGC AGACCAACAA AGCCCTTTGT
GAGTTTCTTG GCTATTCCCA GACCGAACTG CAGTCCCTCA CGTTTCAGCA ACTGACCTGG
CCTGAAGATT TACATACCGA TCTTGAGAGC CTGGAGCAAC TGGCGCGCGG TGACATTAAC
AGCTACTCGC TGGAGAAGCG CTATTACACC CGTAACGGTG AAGTCGTATG GGCGCTGCTG
ACCGTCTCGG TTGTGCGTCA TACGGACGGG TCACCGCTCT ATTTTATTGC GCAAATCGAA
GACATTAATG ACCTCAAACA CACCGAATGG GTGAATAAGC GCCTGATGGA GCGTATTACG
CTGGCGAACG AAGCGGGCGG CATTGGTATC TGGGAATGGG ACCTGCAGCC TGACGTCATC
AGTTGGGACA AACGTATGTT CGAGATGTAC GAAATTCCGG CGCACATCAA GCCGACCTGG
CAGCTCTGGA ACGACAGTAT TATTCCCGAA GATCGCGCGT ACGCCGAACA GGTTATTCGC
GATTCGCTGA TGGCCCGAGT GCCCTTTAAG CTTGAGTTCC GCATCCGCGT GAAAGAAGGC
GTGCGTCATA TCCGTTCCCT GGCGAATCGG GTGCTGAACA AGCAAGGCGA AGTCGAACGG
CTGCTCGGCA TTAATATGGA CATGACCGAA GTTAAGGAAC TTAACGAAGC ATTGTTCCAG
GAAAAAGAGC GTCTGCACAT CACGCTCGAC TCCATCGGTG AAGCGGTACT CTGTACTGAT
GTTGATATGC ACGTCACCTT TATGAACCCC GTTGCCGAGA AAATGAGCGG CTGGACGCAG
CAAGAAGCGA TGGGTCAGCC GATTTTGAGC GTGTTACACA TTACGTTCAG CGAAAACGGT
CCGCCGATGG AAAACATTCA CAGCGGCGAT ATGTCACGTT CCGACATTAA TCAGGATGTC
GTGCTGCACA GCCGCACCGG CGGAACGTTC GATATTCATT ACAGTATTAC CCCATTAAGC
ACGCTGGACG GACAAAACAT CGGTTCCGTT CTGGTCATTC AGGATGTCAC CGAGTCACGT
AAAATGCTGC GCCAGCTCAG CTACAGCGCC TCGCATGACG GCCTCACTCA CCTCGCTAAC
CGCGTCAGTT TTGAAAGCCA TTTAAAGCGC CTTCTGCAAA CCGTGCATGA CACGCATCAA
CGCCACGCGC TGGTGTTTAT CGATCTCGAT CGCTTCAAAG CGGTGAACGA TACTGCAGGA
CACGCCGCGG GCGATGCGCT CCTGCGCGAA CTCTCATCAC TGATGCTCAG CATGCTGCGC
TCCAGCGACG TGTTAGCGCG TCTGGGTGGC GATGAATTTG GTCTGCTGCT TCCGGACTGC
AACGTGGAAA GTTCGCGCTA CATTGCCGGG CGTATCATTC ACGCCATCAA CGATTACCAG
TTCATGTGGG AAGGTCGTCT GCATCGCATC GGTGCCAGCG CCGGGATTAC GCTGCTTGAT
GACAGCAACT ATCAGGTTGC GGAAGTGATG TCTCAGGCCG ACATCGCCTG CTACGCGTCC
AAGAATAATG GTCGTGGCGT GGTGACGGTG TACGAACCAC AGCAGGAACG TATTCACAGC
GCGCGGGGCA TGATGTCGCT GGATGAGCAG TGGCATATGA TCAAAGACAA TCAGTTGCTG
ATGACGGGCC GTAGCGTAGC CTCTCCGCGC ATCCCGGAAA GCAGTAACTT CTGGCTCATC
TCCCTGCGAC TGTGGACCAG CCAAGGCGAC GTTGTAGAAG AACAGGCGTT CCGCTCAGGT
CTGATGGAGC CAGATCTGTT ACATGCGTTG GATCGCCGCA TCTTCCAGAC ATTTTTCCGC
ACCTACGCCA CGCAAGTCGC TACTAAGGGA ATGGGTGTGG CGCTGCCGCT CTCGGCTGAA
GGGCTGTCCA GCACGACGCT GGTGAGCGAA CTGCTCGATT TACTGGAAAA AAGTCCTCTG
CAGGGACGCT TGCTGCATCT GGTTATTCCG GTAGAAACCC TGCAAAACCA GGACGTTCAC
ATTCAGAATG GATTACAAAA ACTCCGTCTG GCGGGATGCC GAATTGTGCT GTGTCACGTC
GGGCGCAATA TGGATGTGTT TAATCATCTC ACCCCGCACA TGGCTGATTA TCTGTTGTTG
GATCCTGAAC TGGTCACCAA CGTTCACGGT AACCTGATGG ACGAAATGAT GGTTTCTATC
ATTCAGGGCC ACGCCCAACG ACTCGGCATG AAAACCATCG CTGGGCCAAG TAACCAGCCG
TTGATGATGG ATACGCTTTC CGGAATTGGT ATCGATTATA TCTACGGCGA CTGCATTGCC
GAGCCGCAGC CGCTAGAAAT TCTGCTCAAT ACCAGCTATT TCGCGATCAA TTAG
|
|---|
| Protein sequence | MASLDKAVMN KQYQRVLVTT PHPVLRLVSL GLVTFIFTLF SLELTRFGTL LAPLWFPTSI
MMVAFYRHAG KMWPGIALAC SLGNILATGL LFSWDSLNVL YPTINAIEAF VGALLLRKML
PWYNPLKNLG DWIRLAIGSA AIPPLLGGVL AWLLVPSEEP LRNFLVWVLS ESIGALALVP
LGLLFKPHYL LRHRNPKLLL ETLVTMAVTL VLCWVAITFL PWPFTCVIVL LMWSAVRLPR
LEAFLVFLVT VMMVSLMMAT NPTPMTTQNS GVMLNAPWLP FLMMLLPANV MTMVMYAFRA
ERKHITESEE RFRNAMEYSA IGMALVGIDG QWLQTNKALC EFLGYSQTEL QSLTFQQLTW
PEDLHTDLES LEQLARGDIN SYSLEKRYYT RNGEVVWALL TVSVVRHTDG SPLYFIAQIE
DINDLKHTEW VNKRLMERIT LANEAGGIGI WEWDLQPDVI SWDKRMFEMY EIPAHIKPTW
QLWNDSIIPE DRAYAEQVIR DSLMARVPFK LEFRIRVKEG VRHIRSLANR VLNKQGEVER
LLGINMDMTE VKELNEALFQ EKERLHITLD SIGEAVLCTD VDMHVTFMNP VAEKMSGWTQ
QEAMGQPILS VLHITFSENG PPMENIHSGD MSRSDINQDV VLHSRTGGTF DIHYSITPLS
TLDGQNIGSV LVIQDVTESR KMLRQLSYSA SHDGLTHLAN RVSFESHLKR LLQTVHDTHQ
RHALVFIDLD RFKAVNDTAG HAAGDALLRE LSSLMLSMLR SSDVLARLGG DEFGLLLPDC
NVESSRYIAG RIIHAINDYQ FMWEGRLHRI GASAGITLLD DSNYQVAEVM SQADIACYAS
KNNGRGVVTV YEPQQERIHS ARGMMSLDEQ WHMIKDNQLL MTGRSVASPR IPESSNFWLI
SLRLWTSQGD VVEEQAFRSG LMEPDLLHAL DRRIFQTFFR TYATQVATKG MGVALPLSAE
GLSSTTLVSE LLDLLEKSPL QGRLLHLVIP VETLQNQDVH IQNGLQKLRL AGCRIVLCHV
GRNMDVFNHL TPHMADYLLL DPELVTNVHG NLMDEMMVSI IQGHAQRLGM KTIAGPSNQP
LMMDTLSGIG IDYIYGDCIA EPQPLEILLN TSYFAIN
|
|---|
| |