Gene Ent638_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_1636 
SymbolpotD 
ID5112081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp1790047 
End bp1791093 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID640491825 
Productspermidine/putrescine ABC transporter periplasmic substrate-binding protein 
Protein accessionYP_001176366 
Protein GI146311292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT GGTCACGCCA CCTGCTCGCG GCAGGCGCAC TTGCCATGAG CATGAGCGCT 
GCACACGCGG ACGACAGCAA AACGCTCTAC TTCTATAACT GGACTGAATA CGTGCCGCCA
GGCCTGCTGG AACAGTTCAC CAAAGAGACC GGCATCAAGG TTATCTATTC GACCTACGAA
TCGAACGAAA CCATGTATGC CAAGCTCAAA ACCTATAAAG ACGGCGCTTA CGATCTGGTG
GTGCCGTCGA CCTATTTCGT CGACAAAATG CGCAAAGAGG GCATGATCCA GAAGATCGAT
AAAACGAAGC TCACCAACTT CAATAACCTC GATCCGCAGA TGCTCAATAA ACCGTTCGAC
CCGAATAATG ACTACTCCAT CCCGTATATC TGGGGTGCGA CGGCGATCGG CGTGAACAGC
GATGAGATTG ACCCCAAAAC GGTGACAAGC TGGGCCGATC TCTGGAAACC GGAATACAAA
GGCAGCCTGC TGTTGACCGA CGACGCTCGC GAAGTGTTCC AGATGGCGCT ACGTAAACTG
GGTTTTTCCG GTAATACGAC TGACCCGAAA GAGATCGACG CGGCGTATAA CGAGCTGAAA
AAGCTGATGC CAAACGTGGC GGCGTTTAAC TCCGACAACC CGGCAAACCC GTACATGGAA
GGCGAAGTGA ATCTGGGGAT GGTGTGGAAC GGGTCGGCGT ACGTTGCGCG TCAGGCCGGG
ACGCCGTTGC AGGTGGTGTG GCCGAAAGAA GGCGGGATCT TCTGGATGGA CAGCTTGTCG
ATTCCGGCAA ACGCTAAAAA CGTCGACGGG GCGATGAAGT TAATTAACTT CCTGCTGCGC
CCGGACGTAG CAAAACAGGT GGCTGAAACC ATTGGTTATC CGACGCCAAA CCTTGCCGCG
CGCAAACTGC TCAGCCCGGA AGTGGCAAAC GATAAGTCAC TGTATCCCGA CGCGGAGACC
GTCAAAAAAG GCGAATGGCA GAACGATGTG GGCGACGCGA GCCGCCTTTA TGAAGACTAT
TATCAGAAGC TGAAGGCGGG CCGCTGA
 
Protein sequence
MMKWSRHLLA AGALAMSMSA AHADDSKTLY FYNWTEYVPP GLLEQFTKET GIKVIYSTYE 
SNETMYAKLK TYKDGAYDLV VPSTYFVDKM RKEGMIQKID KTKLTNFNNL DPQMLNKPFD
PNNDYSIPYI WGATAIGVNS DEIDPKTVTS WADLWKPEYK GSLLLTDDAR EVFQMALRKL
GFSGNTTDPK EIDAAYNELK KLMPNVAAFN SDNPANPYME GEVNLGMVWN GSAYVARQAG
TPLQVVWPKE GGIFWMDSLS IPANAKNVDG AMKLINFLLR PDVAKQVAET IGYPTPNLAA
RKLLSPEVAN DKSLYPDAET VKKGEWQNDV GDASRLYEDY YQKLKAGR