Gene Ent638_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_1601 
Symbol 
ID5112046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp1754421 
End bp1755368 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID640491790 
Product23S rRNA pseudouridylate synthase C 
Protein accessionYP_001176331 
Protein GI146311257 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000249423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG AGACTCCATC CGTAAAAATG GTTGCTATCG CTGATGACGA AGCGGGGCAA 
CGAATCGACA ACTTTTTACG CACCCAATTG AAAGGTGTGC CAAAGAGTAT GATTTATCGC
ATCCTGCGCA AAGGCGAGGT GCGAGTGAAC AAAAAACGCG TGAAGCCGGA ATACAAACTG
GAAGCCGGTG ATGAAGTGCG CATCCCGCCA GTGCGTGTCG CTGAACGCGA AGAAGAAGCG
GTATCGCCGC ATCTCAATAA AGTGGCGGCG CTGACCAATG CCATTTTATA TGAAGACGAC
CATATCCTGG TGCTGAACAA ACCTTCGGGT ACAGCGGTAC ACGGCGGTAG CGGGTTAAGC
TTTGGCGTTA TTGAAGGTTT GCGCGCGTTG CGACCGGAAG CCCGTTTCCT GGAACTGGTC
CATCGCCTTG ATCGCGATAC GTCTGGCGTG TTGCTGGTGG CAAAAAAACG TTCCGCGTTA
CGTTCGTTGC ATGAGCAACT GCGTGAGAAA GGGATGCAAA AAGATTATCT GGCGCTGGTG
CGTGGCCAAT GGCAGTCCCA TGTGAAAGTG GTGCAAGCGC CGCTGTTGAA AAATATTTTG
CAAAGCGGTG AGCGTATCGT TCGCGTCAAC AGCGAAGGCA AGCCCTCGGA AACACGTTTT
AAAGTCGAAG AGCGTTATGA ATTTTGCACG CTGGTACGCT GCAGTCCTGT CACGGGGCGT
ACGCACCAGA TTCGCGTGCA TACTCTTCAT GCCGGTCATC CGATCGCGTT TGACGATCGT
TATGGCGATC GTGAGTTTGA TAAACAACTG GCTGGCACCG GATTATCGCG TTTGTTCCTT
CACGCTGCCG CGTTGAAATT CACCCATCCA GGCACGGGCG AAGAGATGCG CGTAGAAGCG
CCGCTGGACA ATCAGCTCAA GCGTTGTCTT AAGATTCTGC GCGGGTAG
 
Protein sequence
MKTETPSVKM VAIADDEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRVKPEYKL 
EAGDEVRIPP VRVAEREEEA VSPHLNKVAA LTNAILYEDD HILVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV
RGQWQSHVKV VQAPLLKNIL QSGERIVRVN SEGKPSETRF KVEERYEFCT LVRCSPVTGR
THQIRVHTLH AGHPIAFDDR YGDREFDKQL AGTGLSRLFL HAAALKFTHP GTGEEMRVEA
PLDNQLKRCL KILRG