| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1373 |
|---|
| Symbol | rumB |
|---|
| ID | 5114336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 1502837 |
|---|
| End bp | 1503964 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640491560 |
|---|
| Product | 23S rRNA methyluridine methyltransferase |
|---|
| Protein accession | YP_001176105 |
|---|
| Protein GI | 146311031 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGCG CACTCTTTGA TGCCGGTCGT TGCCGCTCCT GTCAGTGGAT AGAGCAGCCG
GTCTCCCAAC AACTCTCTGC CAAAATGACC GATTTGCAGC AGTTACTTGC TGCGCACCCG
GTGGCGGAGT GGTGCGCACC CGTCAGCGGG CCGGAGCAGG GCTTTCGCAA TAAAGCCAAA
ATGGTGGTGA GTGGGAGCGT CGAAAAACCG CTGCTGGGGA TGTTGCATCG CGACGGTACG
CCAGAAGATT TGACCGACTG TCCGCTCTAT CCTGCTTCGT TTGAGCCGGT CTTCGCGGCG
CTGAAACCCT TTATCGCTCG CGCGGGTTTA ACGCCCTATA ACGTCGAGCG CAAACGCGGT
GAACTTAAAT ACCTGCTGTT AACCGAAAGC CAGCTCGACG GCGGAATGAT GCTGCGCTTT
ATTCTGCGTT CCGAAGCCAA ACTTGAACAA CTGCGCGCGG CGCTACCGTG GCTACAGCAG
CAGTTACCGC AGCTGAAAGT GATCACGGCG AATATTCAGC CAGTGCATAT GGCGATTATG
GAAGGGGAGA GAGAGGTTTT CTTCACCGAC CAGCAGGCGC TGGCGGAACG CTTTAACGAC
GTCCCGCTGT GGATCCGCCC GCACAGTTTC TTCCAGACCA ACCCGACGGT GGCGAGTCAG
CTCTATGCCA CAGCGCGCGA CTGGGTTCGG GCGCTAAATA TCCATCATAT GTGGGATTTA
TTCTGTGGCG TTGGCGGCTT TGGCCTGCAC TGTGCTACGC CGCAGATGAC GCTGACAGGG
ATTGAGATTT CACCAGAGGC CATTGCCTGC GCCAAACAAT CTGCTGCGCA ATTAGGCTTA
ACCGATCTGC ATTTTCAGGC GCTCGATTCT GCTGAGTTCG CCACCGGCCA GGGGCGCGTG
CCTGAACTGG TGCTGGTGAA TCCTCCGCGT CGGGGCATCG GTAAAACGCT GTGCGATTAC
CTGAGCCAGA TGGCGCCTGA CTTCATCATC TATTCCAGCT GTAACGCTCA GACCATGGCA
AAGGATTTTG GCCATTTGCC GGGCTACCGT GTAGAGCGCG TGCAGCTTTT CGATATGTTC
CCGCATACCG CGCACTACGA AGTGTTGACG CTGCTCGTTA AATCTTAA
|
|---|
| Protein sequence | MQCALFDAGR CRSCQWIEQP VSQQLSAKMT DLQQLLAAHP VAEWCAPVSG PEQGFRNKAK
MVVSGSVEKP LLGMLHRDGT PEDLTDCPLY PASFEPVFAA LKPFIARAGL TPYNVERKRG
ELKYLLLTES QLDGGMMLRF ILRSEAKLEQ LRAALPWLQQ QLPQLKVITA NIQPVHMAIM
EGEREVFFTD QQALAERFND VPLWIRPHSF FQTNPTVASQ LYATARDWVR ALNIHHMWDL
FCGVGGFGLH CATPQMTLTG IEISPEAIAC AKQSAAQLGL TDLHFQALDS AEFATGQGRV
PELVLVNPPR RGIGKTLCDY LSQMAPDFII YSSCNAQTMA KDFGHLPGYR VERVQLFDMF
PHTAHYEVLT LLVKS
|
|---|
| |