| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_0470 |
|---|
| Symbol | |
|---|
| ID | 5113642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 535759 |
|---|
| End bp | 537759 |
|---|
| Gene Length | 2001 bp |
|---|
| Protein Length | 666 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640490639 |
|---|
| Product | SMC domain-containing protein |
|---|
| Protein accession | YP_001175209 |
|---|
| Protein GI | 146310135 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.349593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0900334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAATTA AACAGCTGGT ATTGCGTAAT TTCCGTGTAT TTAATGGTAC TCATGTCATT
GATTTGGCGC CGAGAAAGCG CCAGAACGAT GATAATTCGC GTCCGATAGT TCTTTTCGGT
GGGCTTAACG GAGCAGGAAA AACATCAATT CTGTCTGCAA TCCGCCTGGC ATTGTATGGT
CGGTTAGCGT TTGGCCCAGC AACTCAACAA CAAGAGTATG TTGAAGAACT CAGCGCATTA
GTTCACAACG GCTCAACTAC TGGTGAACGG CCAAGTGAAG CGTCGATTGA ACTTGTTTTC
ACCTACAACA AAGGCGGGCA TGAAGCTGAA TTTACCGTTA CGCGCTCGTG GAAAAAAGGG
AAAAAGGATC AACTATCCCT CCAACAAGAT GGCCAACTTC TTGAAGAGTT GGATTATGAT
CAATGCCAGG GATTTTTGAA TGAATTAATT CCGCATGGAA TTGCCGATTT GTTCTTCTTT
GATGGTGAAA AAATTGCAGA GCTCGCTGAA GATGACTCTG GAAATATTCT GCGTACAGCC
GTACGTCGCT TGTTAGGTTT AGATCTCATC TCGAAACTTC GTAATGATTT GATGATCTTT
GTTAAGCGTC AGCAATCCAG CCAACTCGCA GGCTCCCAAC AACAAAAACT TGCTGAACTT
GAAGAACAGG TTAAGCAGTT TGCTTTCCAG ACAGAGCAGA TTTTAGAAAA AGCTGATTTT
GCTAAAATGC GAATTGATTT GCTATCAAAA GAAATCAACC GATATGAAGC ACTTCTGAAT
GCGCAAGGTG GTGCATTTGC TCAAACAAAA GCACAAGAAA AACAGAAAGT TGATACTCTG
CTAAAAGAAA AAGATCGCCT TGAAAAAGCA TTGCGCCATG AATGCGATAG CTCACTACCT
TACGCTCTGG CACCTAAGAC TCTAGAGCGT TTGCTTGAGC AAATTAGTGC AGAGATACAA
ATTAAGCAGG CGGACAGTTT TGAAAAGGAA TTAACTCAAT TTCTTACGCA GCTGAAAAAT
GATATTTCAT TCCGCTCAGG AACTACTGGC AAAATTGCTG CCGAAGCAAT TGAAGATAAT
CTGAAAGATT ACCTGGCAGG GAAACCCAAA GGTGAGCTGC TGTTTGACAT CTCAGAACGT
GAAGCTGGGA TGATCCAACA ATCTATCGAG AAGGACAGCA AGAAAGCCTG GCAGCGTTTT
GATCTTTATC GTCACCAATT GGCTGAAGTT GAAGAGCAGC TTGAACAAGC CGCGGCAAAC
ATTGCTCGTG CCCCGGAAGA TGATCAGCTT TTCGATATAT TTGAAAAACT TCGTGAGCTT
GACCGTAAAC GCGAGAGTAA ACGGCAGGAG TATCGCTCGC TGTTGGAAGA AGCAAAACAA
ACTAAGCAGC TGCAACTGGA CTGTGCTCGT CAGGTACAAA AAACACACGA TCTGGCACGT
AATCAACATA ACTCCGATAG TGCATTTAAT AATGCCCAAG AAACAATCAA CCTGCTTGAC
CGCTACAGTG AACTTTTAAC TCAAGCAAGG GTGAAAACGC TATCAGCGAA TTTTGAAGGT
GCTTACCGTA AATTAGCTCG TAAAGAGGAT TTGCAGCTCA ATGCACACAT CAATCCTGAA
ACGTTTGATG TGGAATTAGT GGATGAAAAC GCCTCAGTGA TCAATCGCAA GCTACTCTCT
GCCGGAGAGA AACAGATCTA TGCGATTGCG ATTCTTGAGG CCCTGGCAAA AACTTCTGGT
CGTGATTTGC CGGTAATCAT TGATACTCCA CTGGGCCGTT TAGACTCTCA ACATAGAGAT
AAACTGATTA ACCACTACTT CCCGTTTGCC AGCCATCAGG TAGTGCTGTT GTCTACAGAT
ACAGAAGTGG ATGAGCGTTA TTTTGTCGAT CAACTTCGAG ATGACATATC TCATGCTTAT
GAGATAGTGT TCAATGCACA TACGAAATCT TCCGCACTTA AGCCAGGTTA TTTCTGGGAA
TTAACTAAGG AGGCAATCTG A
|
|---|
| Protein sequence | MLIKQLVLRN FRVFNGTHVI DLAPRKRQND DNSRPIVLFG GLNGAGKTSI LSAIRLALYG
RLAFGPATQQ QEYVEELSAL VHNGSTTGER PSEASIELVF TYNKGGHEAE FTVTRSWKKG
KKDQLSLQQD GQLLEELDYD QCQGFLNELI PHGIADLFFF DGEKIAELAE DDSGNILRTA
VRRLLGLDLI SKLRNDLMIF VKRQQSSQLA GSQQQKLAEL EEQVKQFAFQ TEQILEKADF
AKMRIDLLSK EINRYEALLN AQGGAFAQTK AQEKQKVDTL LKEKDRLEKA LRHECDSSLP
YALAPKTLER LLEQISAEIQ IKQADSFEKE LTQFLTQLKN DISFRSGTTG KIAAEAIEDN
LKDYLAGKPK GELLFDISER EAGMIQQSIE KDSKKAWQRF DLYRHQLAEV EEQLEQAAAN
IARAPEDDQL FDIFEKLREL DRKRESKRQE YRSLLEEAKQ TKQLQLDCAR QVQKTHDLAR
NQHNSDSAFN NAQETINLLD RYSELLTQAR VKTLSANFEG AYRKLARKED LQLNAHINPE
TFDVELVDEN ASVINRKLLS AGEKQIYAIA ILEALAKTSG RDLPVIIDTP LGRLDSQHRD
KLINHYFPFA SHQVVLLSTD TEVDERYFVD QLRDDISHAY EIVFNAHTKS SALKPGYFWE
LTKEAI
|
|---|
| |