Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_1249 |
Symbol | |
ID | 6263449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | + |
Start bp | 1349406 |
End bp | 1350170 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642611728 |
Product | polysaccharide deacetylase |
Protein accession | YP_001876136 |
Protein GI | 187251654 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.651285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAT TTCTGTTTTT AACAGCTTTT ACGCTATTAC TTCTTATAAT TATATCCTAT CTGCTTTGGT GGATACCAAG GCCAAAACTG GTAGCGTTAA TGTATCATCA CATAGGCCCG GTTACCAACG AAGAAGAGAA AGATTTTTTT ATAGAAGCTA AAACTTTTGA ACAACACCTT AGCCTGATAA GAGAAAAAGG GTTTAATTTT GTATCGATTG AAGATATTGA AACGCACCAA GCCACAAAAA GTTATTTGCC TTACAAACCC GTAGTTATTA CTTTAGACGA CGGTTGGGAA GATAATTATA CCTACGCTTT TCCAATACTT AAAAAACTTG GCGTAAAAGC CAATATTTTC CTGTCGGTAA GCCAAATCGG CACGCCCGGC ATGCTTAATT GGGAACAGGT AAAGGAAATG AATGAAAGCG GGCTTGTATC ATTCGGTTCA CACGGGCTTA CGCATAAGAG GCTGCGCTCT CTTACAAGTG AAAACGTTTC TTACGAAATG CAAAACAGTA AAAAAATATT AGAAGAAAAA CTTGGCAAAA AAGTGTTAAG CTTCTGTTAC CCTTTTGGAG CGTTTGACAA AAGAATAAGA TATCTTTGCT TTAAAGCCGG TTACATCATA GATTACGGCA CCAGAAAAGG CGTTAACGTA ATGCCGTGGA ACGGCAGACA CCCCCTTCAA CGCGCGCATG TAATGCGAAA TAATTCTTTA AGGCATTTAA AAACACAGCT TATATTCGGA AGGGAAAAAA TCTAA
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Protein sequence | MILFLFLTAF TLLLLIIISY LLWWIPRPKL VALMYHHIGP VTNEEEKDFF IEAKTFEQHL SLIREKGFNF VSIEDIETHQ ATKSYLPYKP VVITLDDGWE DNYTYAFPIL KKLGVKANIF LSVSQIGTPG MLNWEQVKEM NESGLVSFGS HGLTHKRLRS LTSENVSYEM QNSKKILEEK LGKKVLSFCY PFGAFDKRIR YLCFKAGYII DYGTRKGVNV MPWNGRHPLQ RAHVMRNNSL RHLKTQLIFG REKI
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