Gene Emin_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1249 
Symbol 
ID6263449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1349406 
End bp1350170 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content38% 
IMG OID642611728 
Productpolysaccharide deacetylase 
Protein accessionYP_001876136 
Protein GI187251654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.651285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAT TTCTGTTTTT AACAGCTTTT ACGCTATTAC TTCTTATAAT TATATCCTAT 
CTGCTTTGGT GGATACCAAG GCCAAAACTG GTAGCGTTAA TGTATCATCA CATAGGCCCG
GTTACCAACG AAGAAGAGAA AGATTTTTTT ATAGAAGCTA AAACTTTTGA ACAACACCTT
AGCCTGATAA GAGAAAAAGG GTTTAATTTT GTATCGATTG AAGATATTGA AACGCACCAA
GCCACAAAAA GTTATTTGCC TTACAAACCC GTAGTTATTA CTTTAGACGA CGGTTGGGAA
GATAATTATA CCTACGCTTT TCCAATACTT AAAAAACTTG GCGTAAAAGC CAATATTTTC
CTGTCGGTAA GCCAAATCGG CACGCCCGGC ATGCTTAATT GGGAACAGGT AAAGGAAATG
AATGAAAGCG GGCTTGTATC ATTCGGTTCA CACGGGCTTA CGCATAAGAG GCTGCGCTCT
CTTACAAGTG AAAACGTTTC TTACGAAATG CAAAACAGTA AAAAAATATT AGAAGAAAAA
CTTGGCAAAA AAGTGTTAAG CTTCTGTTAC CCTTTTGGAG CGTTTGACAA AAGAATAAGA
TATCTTTGCT TTAAAGCCGG TTACATCATA GATTACGGCA CCAGAAAAGG CGTTAACGTA
ATGCCGTGGA ACGGCAGACA CCCCCTTCAA CGCGCGCATG TAATGCGAAA TAATTCTTTA
AGGCATTTAA AAACACAGCT TATATTCGGA AGGGAAAAAA TCTAA
 
Protein sequence
MILFLFLTAF TLLLLIIISY LLWWIPRPKL VALMYHHIGP VTNEEEKDFF IEAKTFEQHL 
SLIREKGFNF VSIEDIETHQ ATKSYLPYKP VVITLDDGWE DNYTYAFPIL KKLGVKANIF
LSVSQIGTPG MLNWEQVKEM NESGLVSFGS HGLTHKRLRS LTSENVSYEM QNSKKILEEK
LGKKVLSFCY PFGAFDKRIR YLCFKAGYII DYGTRKGVNV MPWNGRHPLQ RAHVMRNNSL
RHLKTQLIFG REKI