Gene Emin_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1225 
Symbol 
ID6262863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1325570 
End bp1326250 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content42% 
IMG OID642611703 
Productpeptidase M50 
Protein accessionYP_001876112 
Protein GI187251630 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.460426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.363921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA ACTGGATTGC ATTTCCCATT TTGTTTTTAT CAATTGTGCT TCATGAAGTG 
GCGCACGGGT ATACGGCCTT TAAACGGGGC GACGACACCG CGTACCATTT AGGCCGCCTT
ACGCTTAACC CGATACCGCA CGTGGATCCG GTAGGGTCAA TTATAATCCC TTTGCTTTGT
TATTTTTCGG GGATGCCTGT TTTCGGCTGG GCAAAACCCG TGCCTATTAA TATGGCAAGG
TTAGAACACC CCAATTCCGA CATGGGCAAA GTTTCTTTAG CGGGGCCCAT GACAAACGTG
CTTATTGCGC TTATAGCGGC GCTCGCTTTA AAAATAGCTC TTATAACCAC AAATAATTTT
ACGTCAGTCG GGCCGCAACA CGCGCAGTTG GCTGGTATTT TTGTTTTAAC GATGTTTCTT
TTTATGCAAA TTAATATTAT GCTTGCCGTT TTTAATATGA TGCCTATTTT GCCGTTAGAC
GGCGGCAGGG TTTTAATGTC AATTTTGCCG CATAACCTGC AGTTAAAATA CGGGCACACT
GAACGTTACG GCATGATGGT TGTTATAATT TTTATAGTTA TTGGCGGGGC AAGGTTTATT
GTTTGGCCTA TAGCCGGTTT AATTTTAAAA TTAATTGAAA TTTCTTTCGG GCTACAGCCT
GTATTTGGTT TATTGAGGTA A
 
Protein sequence
MNLNWIAFPI LFLSIVLHEV AHGYTAFKRG DDTAYHLGRL TLNPIPHVDP VGSIIIPLLC 
YFSGMPVFGW AKPVPINMAR LEHPNSDMGK VSLAGPMTNV LIALIAALAL KIALITTNNF
TSVGPQHAQL AGIFVLTMFL FMQINIMLAV FNMMPILPLD GGRVLMSILP HNLQLKYGHT
ERYGMMVVII FIVIGGARFI VWPIAGLILK LIEISFGLQP VFGLLR