Gene Emin_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1096 
Symbol 
ID6263617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1190134 
End bp1190607 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content37% 
IMG OID642611576 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875985 
Protein GI187251503 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.292656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGG GATTTACTCT TATTGAATTA TTGGTAGTTG TTTTAATAAT AGGCATTTTA 
GCGGCAATCG CTTTGCCTCA ATATACTAAA TCGGTTGAAA AAAGCCGTAT ATCCGAAGCA
AAGATTGCAA TGGCTACTTT GGACAGAATG GTGTCAATTT CAAACCTGGA AAAGGGTGGT
GTTAGCTGGG ATCTTGTTGA AACCTCATCA ATAACTTTGC CGGGCACATA TTCTTGCGAT
TGTTGGGATA ATGAATGTTG TTATAAAACT AAAGATTGGG AGTATGGCGT TTCTATCGGT
TCTATAATTA CATATGCGCT AAGAACAAAA GGAAATGAAA ACTCTTACTT CTTAACCAGA
GAGTATGATT CGAGTTTTTT AAAACCCGTA ACACCTTTGA CTTGTCATAA TTTAGACAGT
ACCGACGGCT GCAAAGCCGC ATGCGGTAAA ATAACAAATT GTGTGGTTAA CTAA
 
Protein sequence
MKEGFTLIEL LVVVLIIGIL AAIALPQYTK SVEKSRISEA KIAMATLDRM VSISNLEKGG 
VSWDLVETSS ITLPGTYSCD CWDNECCYKT KDWEYGVSIG SIITYALRTK GNENSYFLTR
EYDSSFLKPV TPLTCHNLDS TDGCKAACGK ITNCVVN