Gene Emin_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1050 
Symbol 
ID6263167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1142991 
End bp1144436 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content34% 
IMG OID642611530 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001875940 
Protein GI187251458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AATTAATATC TTTTTTAACC GCTTCTCTTA TAATGTTTAG TATTTTTGCC 
CATGCGCAAA ATATAGCGGA CACGGCAACA CCGCAACAGG TAAATATAGT TGTGCAGACA
AAAGTCCAAA CAACTCCGAA AAATACCGCC GCATTAACTG CGAACGATGG TTCTGCCGCC
AGCCCGTCAA AAGACGCGCA AATAACGCCT ATTAAAGTCG AATCTAAATA CTTTATAATA
ACAATAGTAA AAGATTTAAA AATATCTTAC ATATTACTAA AGCAACTGGT GATTGCCCTT
ATAATTTTAT TAATCACGTT GCTTTTAATA AAAATTATTA ACGTCCTATA TTACCAGATA
ATAAACTTGA TTTGGAAAAA GAAAGATAAA ACAAACGACG CCTTGCATAA TATTATAGAC
ATAGGCAGGC AGACAAAGTT TCTTTTGGCT TTTATAAGAG TTATAAGATT TATTTTAATA
GCGTTAATTC TATATATTTT CTGCTCTTCT TTTTTATTTC TTTTTCCGGT AACAAAAGGT
ATAGCTTCTA AACTTTTTTT ACTTATAAAA GGTCCTTTGG TGTCATTTGT CATAGCTGTG
TGGGATTATC TGCCCAATCT GATAGCCATT ATAATAATAT TGGCCATTTC TTACGGTTTG
TCTAAATTTA TGCGTCTTGC CGCGAAAAGG GTTGCCACAG GCAAAACAGT TATAAAAGAT
TTTGACCCGG ACTGGGCCAT TCCCACTTAC CATATAACTC TGGTTGTACT TATTGCTTTT
ACTTTTATCT TTTTATTCCC GCATTTACCC AAATCCAACT CCGCTGTTTT TAAAGGCATT
TCTGTATTTT TAGGCGTGCT TTTATCCTTA GGTTCAACAA CCTTTATAAG CAATATAGTA
TCGGGTTTTG TTATAACGTA TATGAGTCCT TTCAAACTTG GAGATTTAAT TAAAATGGGC
GACAATGTAG GAAACGTAAT TGAAAAAAAC GGCCTTGTAA CCCGCATAAA AACAATAAAA
AATGAAGTTG TTACAATACC AAACTCAACT ATAATGACGT CAAACACTAT TAATTATACG
GTGTCCGCAA AAGAATACGG ACTGATGCTG TATGCAGAAG TATACGTAGC TTATGACGTA
CCGTGGGAAA AGGTTAACGG CGCGCTTATG CAAGCTGCCC AAAACATGCC CGATATTCTT
AAAACCCCGC CGCCTATTGT TATACAAACA GGGTTAGAAA ATTCTTATGC TAAATACCAG
CTAAATGTTT TTACAGATAA CGCGAATAAA ATGTTTGATA TCTACAGCGT TCTTTATAAA
AATATTCAAG ATTCTTTTAC AAAAGAAAAA ATAGAGCTTG CCGTGCCTGA AATTTTATCT
TTAAAAACAC AGCCGTACCA ACCCCCAAAC CCCATTTTAC AACCTGGCGA GGACATAAAA
AAATAA
 
Protein sequence
MKIKLISFLT ASLIMFSIFA HAQNIADTAT PQQVNIVVQT KVQTTPKNTA ALTANDGSAA 
SPSKDAQITP IKVESKYFII TIVKDLKISY ILLKQLVIAL IILLITLLLI KIINVLYYQI
INLIWKKKDK TNDALHNIID IGRQTKFLLA FIRVIRFILI ALILYIFCSS FLFLFPVTKG
IASKLFLLIK GPLVSFVIAV WDYLPNLIAI IIILAISYGL SKFMRLAAKR VATGKTVIKD
FDPDWAIPTY HITLVVLIAF TFIFLFPHLP KSNSAVFKGI SVFLGVLLSL GSTTFISNIV
SGFVITYMSP FKLGDLIKMG DNVGNVIEKN GLVTRIKTIK NEVVTIPNST IMTSNTINYT
VSAKEYGLML YAEVYVAYDV PWEKVNGALM QAAQNMPDIL KTPPPIVIQT GLENSYAKYQ
LNVFTDNANK MFDIYSVLYK NIQDSFTKEK IELAVPEILS LKTQPYQPPN PILQPGEDIK
K