| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0933 |
|---|
| Symbol | |
|---|
| ID | 6262599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 1036165 |
|---|
| End bp | 1037748 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642611412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001875823 |
|---|
| Protein GI | 187251341 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000356044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000000000476431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GGTTCACCTT AATAGAAATA GCTGTGGTAG TTTTAGTAAT AGCTATTTTA
GCGGCTATAG CTTTGCCGCA GTACAGAAAG TCGTTAGAAC GCTCAAGAGC TGCCGAAGCT
TTTGACATCC TTACAGAGAT AAGGAACAAA CAAGAATCCA GGGATTTACT TGGCACGGGC
ACCGCCAAAG GCTATACTGT AAAGTTTAGC GATTTGGGGG AAGTAATAGC GGGCAAAACC
TCCACAACAA ACACGTTAGA CACAAAACTT TTTTCATATG TTCTTTCAGA TAATCCTTAC
CCTCAGGCGT ACGCCAAAAG AAAAGATTTA GATTATTCAA TAGTTCAAAC CAAAGGCTAC
CAAGACAGCG CATTGTGTTG TATAGGCAAA GACTGCGATA TGGTAGATAA TGTTTTAAAA
GGGTGTGAGA AGACAGCGTG TCCTACAACA TGCGCGGCTG GATATAAAAG AACAGGGTAC
TTTTTTTCGG AAGACGGGCC TTGCTGTGAA GCTAAAACGT CGTGCCCGAC AACATGTCCT
ACGGGACAAA AAAGAAGCAG CGTGCAGTAT ACGGAAGATG GAGCGTGCTG CGTAGCCAAA
ACATCATGCC CGACAACATG TCCTACAGGC CAGCAGAGGA CAAGCGTACA ATATAGTGAA
GACGGAGCAT GCTGCGTATC AAAAACGTCG TGTCCCGCAA CATGTCCTAC AGGTCAAAAG
AGAACAAGTG CCCAATATTA TGAAGACGGA GCATGCTGCG TATCAAAAAC AGCGTGTCCT
ACAACGTGTC CTACAGGACA GCAGAGGACA AGCGTACAAT ATTATGAAGA CGGAGCCTGC
TGCGTAACAA AAACAGCGTG TCCCGCAACA TGTCCTACGG GTCAAAAAAG AACAAGTGCC
CAATATTATG AAGACGGAGC ATGCTGCACG GCTAAAACAG CGTGTCCTGC GACATGTCCT
ACGGGCCAGG AAAGAACAAG CGTGCAATAC AGTGAAGACG GAGCGTGTTG CCAAACCAAA
ACCTGCGGCA GCGGACAAAC CCTTGTTGGT GGAGTATGTA AAACAGCGTG TCCCGCCACA
TGCCCCACGG GCCAGGAAAG GACATCCGCG CAATACAGTG AAGACGGAGC GTGCTGCAAA
GCAAAAACAT GTCCCACAGG GCAAACCCTT GTTGGTGGAG TATGTAAAAC AGCGTGTCCC
GCCACATGTC CCACGGGCCA GGAAAGGACA TCCGCGCAAT ACAGTGAAGA CGGAGCGTGC
TGCAAAGCAA AAACATGTCC CACAGGGCAA ACCCTTGTTG GTGGAGTATG CAAAACATCA
TGTCCCATTA CATGTCCTAT AGGCCAGCAG AGGACAACCG TCCAATATAC CGAAGACGGA
GCATGCTGTA AAAGTAAACC ATGCCCGTTA GTCCCGCAAT CGATAATTGA TGATTGTAAC
AATGCTTCTT ATGCCGTGTG GAACGAAAGT GAATGCGGTT GCAGATGTTG TAATAAGCAA
CATGGGAATC CATATTTAGA ACCTTCTACA GGTATTGTAA GATGTCTCCC CACAGGTGTA
GCAGCATATT TATGTGCGGT GTAA
|
|---|
| Protein sequence | MKKGFTLIEI AVVVLVIAIL AAIALPQYRK SLERSRAAEA FDILTEIRNK QESRDLLGTG
TAKGYTVKFS DLGEVIAGKT STTNTLDTKL FSYVLSDNPY PQAYAKRKDL DYSIVQTKGY
QDSALCCIGK DCDMVDNVLK GCEKTACPTT CAAGYKRTGY FFSEDGPCCE AKTSCPTTCP
TGQKRSSVQY TEDGACCVAK TSCPTTCPTG QQRTSVQYSE DGACCVSKTS CPATCPTGQK
RTSAQYYEDG ACCVSKTACP TTCPTGQQRT SVQYYEDGAC CVTKTACPAT CPTGQKRTSA
QYYEDGACCT AKTACPATCP TGQERTSVQY SEDGACCQTK TCGSGQTLVG GVCKTACPAT
CPTGQERTSA QYSEDGACCK AKTCPTGQTL VGGVCKTACP ATCPTGQERT SAQYSEDGAC
CKAKTCPTGQ TLVGGVCKTS CPITCPIGQQ RTTVQYTEDG ACCKSKPCPL VPQSIIDDCN
NASYAVWNES ECGCRCCNKQ HGNPYLEPST GIVRCLPTGV AAYLCAV
|
|---|
| |