Gene Emin_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0780 
Symbol 
ID6263289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp859949 
End bp860422 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content37% 
IMG OID642611257 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875672 
Protein GI187251190 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTTACGTT AATAGAACTT TTGGTTGTAG TTTTAATTAT AGGCATACTA 
GCGGCAATAG CTTTGCCCCA ATATACAAAA ACTGTTGAAA AGGCCCGCGC GGCGGAAGTT
TTGGCTTCTA TAAGAACTTT AAAAGACGCG CTTGAAATTT ATTATATGGA AACCGGCGTG
TATCCTACAG ACCCTGAAGC GTTGAATGTA ACTATACCGA TATCATCTAA TTACGATATT
GCACTGGATA ATACATTAAC AAATATAAGG GCTGTAAATA AAAAAGGATA TTCCGGTTAT
ATACATATAA GATACTTCCC CAAAAATGTT GTTTCACCCT TCGCGGGGAA ACTGCTTTGC
GTAGCAAATG ACGCTTCCGC AAGTTCTACC GCTCTTTGTA AATCATTAGG AGGGAAATCT
TTGGGTCATT ATATCCATAT GTCTAGCGGA TATATCGCTT ATGAATTAAA TTAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTK TVEKARAAEV LASIRTLKDA LEIYYMETGV 
YPTDPEALNV TIPISSNYDI ALDNTLTNIR AVNKKGYSGY IHIRYFPKNV VSPFAGKLLC
VANDASASST ALCKSLGGKS LGHYIHMSSG YIAYELN