Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0588 |
Symbol | |
ID | 6262808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | - |
Start bp | 641831 |
End bp | 642550 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642611059 |
Product | ABC transporter related |
Protein accession | YP_001875480 |
Protein GI | 187250998 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0166343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000000281481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAATTAC GTTCTAAAGC CATAGAAAAA GTTTATAAAC AAAGACGCGT TGTTAAAGGC GTTGATATAA ATGTTAAATC AGGTGAAATT GTTGGTCTTT TAGGTCCCAA CGGCGCCGGC AAAACAACAA GTTTTTATAT GCTTGTGGGT TTTATAGAAC CTACCGCCGG GCAAGTGTTT ATAGACGATA CGGACGTTAC CCAGCTTCCT ATGTTTGAAC GCGCCAGGCA CGGGCTTGGC TATTTAGCGC AGGAGCCTAC AATATTTAAA GGTTTAACCG TTGAGGAAAA CCTTCTTGCG GTGCTTGAAC GAATTGAACC GGACGTTAAT AAAAGAAAAG AACGCGTAGC CGGCCTGCTT GAGGAATTTG GGCTTACAAA ACTCACAAAA CAAAAGGCAT GGACATTATC CGGCGGTGAA AAAAGACGTA TGGAAATAGC AAGATGTATG ATAAGCGACC CTAAAATTAT TTTACTTGAC GAACCGTTTG TTGGCATCGA CCCGATTACC GTTTCAGATT TAAGGCAAAT GATTTTTAAA CTTAAAGATA AAGGAATAGG CGTTCTTATT ACAGACCATA ACGTACGCGA AACTTTGCCT CTAACCGAGA GAGCTTACCT TATTTACGAC GGACAAATAC TTGTGGAAGG CGATCAAGAT ACACTGCTTA ATGACTCCAA CGCGCGCAAG CTTTATCTGG GCGAAGATTT TAAAATGTAG
|
Protein sequence | MQLRSKAIEK VYKQRRVVKG VDINVKSGEI VGLLGPNGAG KTTSFYMLVG FIEPTAGQVF IDDTDVTQLP MFERARHGLG YLAQEPTIFK GLTVEENLLA VLERIEPDVN KRKERVAGLL EEFGLTKLTK QKAWTLSGGE KRRMEIARCM ISDPKIILLD EPFVGIDPIT VSDLRQMIFK LKDKGIGVLI TDHNVRETLP LTERAYLIYD GQILVEGDQD TLLNDSNARK LYLGEDFKM
|
| |