Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Emin_0579 |
Symbol | |
ID | 6262746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Elusimicrobium minutum Pei191 |
Kingdom | Bacteria |
Replicon accession | NC_010644 |
Strand | + |
Start bp | 633989 |
End bp | 635719 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642611050 |
Product | type II secretion system protein E |
Protein accession | YP_001875471 |
Protein GI | 187250989 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000642239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGAA AACTAGATGA TATTTTAATC GATTCCGGCA TTATAAACGC TGAGCAGCTT AAAAAGGCCA CATTGTACGC CAACCAAAAC AATGTTTCTT TGGGCGACGC TACTATTAAA CTCGGCTTCG CTACGGAAGA GCAAATAACA ATTGCGCTCT CAAAACACTT TTCCGTTCCT TACGCTTCCA AAGAAAATAA CATTTTAATA CCTGAAAAGG AACAAAACCT GCAAGATGTT GTAAATGAAA AATTTGCCAG GGAAAACATG GTTCTTCCTT TATTTTTGGA AGAAGGCGTT TTGGCTATAG CAATGTATGA CCCTTCAAAC GTTTTTTTAG TTGATAACGT AAAAATGATG ACCGGCTATG ATATCCAACC GTTTATCGCC AGTAAATCCC AAATTTTAAC CGCTATTGAC GTTTTTTACG GTGGTAAAGA CTTAATTGAA GAAGTTGTTG TAGGCAACGC CGCCGTTAAA GAGGAAGAAG GGGACGACAT TGAAGTTATT TCCGTAGAAG GAAAGCTTGA CTTAGATACT TTAAAAGGCA GCGGATCGCA CTACATTAAA CTTGTTAACG CTATTTTAAA GCAAGCTATT TCGGAAAGAA CTTCCGATAT TCACTTGGAA ATGTTTGACG AAATGGTCAG CTTGCGTTTC AGAATCGACG GCGCGCTTTA TGAAAGAACC CCGCCTCCTA AGGAAAGCGT TGCGGCTATT ATTTCCCGTA TTAAAATTTT ATCTAAGTTA GACATTGCCG AAAAGCGTTT ACCGCAAGAC GGCAGCTTCG CCATAAAGTA CCAGAACAGA ACCATTGAAG TCCGTGTTTC GGTTTGTCCC ACGGTGTTTG GCGAAAAGCT GGTTCTTCGT ATTTTGGATA AAGGTACCAG CGTTCTTACT ATTGAAAGGC TTGGCTTTGA GCCCAGACAA AGGGAAGACT TTTTATCTGC GGCTAACTTA CCGCACGGGT TGATATTTCT TACAGGGCCT ACAGGTTCGG GTAAATCAAC CACGCTTAAC GCCGTTTTAT CAACAATTAA AACCACTGAA CTTAACTTTA TGACGCTGGA AGATCCTGTA GAATATAAAC TTCAGGGTAT AAGCCAGGTG CAGGTTAAAC CACAAATCGG TTTAACTTTT GCCGCGGGCC TGCGTTCTTT TCTCCGCCAA GATCCTGACG TTATCTTGGT AGGTGAAGTC CGCGATAATG AAACGGCCGA ATCATGTTTA AAAGCCGCTC TTACAGGCCA CTTAGTGCTT TCAACGCTGC ACACTAACGA AGCTTTGGGT GCGATTCCGC GTCTTATTGA TATGGGTATG GAGGCGTTCT TGCTTTCCAG CTCTTTAGCT TTAGTGGCGG CGCAGCGTCT TATCAGAAAG CTTTGTCCGC ATTGCAGGCG TCCTTTTACG CCTTCACCTG AGCTTGTTGA ACAGGCTTTA AGGGAATCAA AGCTTCCTCC CGGGGATAAA GACACGTGGA CTTTTTACCA AAAGGTAGGC TGTCCCAAAT GCAGCGAAAC CGGGTATTTA GGCCGTATGG CTATTTATGA AGTTTTTAAA ATCAATGAGG AAATGAGAAA TATTATTTAT AAAACGCAGG ACCTTATTGA CCTTAACCGG GCTGCTGAAA GGTCCGGCGC GTGGAACCTT CGCGCGAGCG GTTGGAGAAA GGCCGTTAAA GGGTTAACAA CACATGAGGA AATTTTATCC GTCACCACGT TGGAAGAATA G
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Protein sequence | MSRKLDDILI DSGIINAEQL KKATLYANQN NVSLGDATIK LGFATEEQIT IALSKHFSVP YASKENNILI PEKEQNLQDV VNEKFARENM VLPLFLEEGV LAIAMYDPSN VFLVDNVKMM TGYDIQPFIA SKSQILTAID VFYGGKDLIE EVVVGNAAVK EEEGDDIEVI SVEGKLDLDT LKGSGSHYIK LVNAILKQAI SERTSDIHLE MFDEMVSLRF RIDGALYERT PPPKESVAAI ISRIKILSKL DIAEKRLPQD GSFAIKYQNR TIEVRVSVCP TVFGEKLVLR ILDKGTSVLT IERLGFEPRQ REDFLSAANL PHGLIFLTGP TGSGKSTTLN AVLSTIKTTE LNFMTLEDPV EYKLQGISQV QVKPQIGLTF AAGLRSFLRQ DPDVILVGEV RDNETAESCL KAALTGHLVL STLHTNEALG AIPRLIDMGM EAFLLSSSLA LVAAQRLIRK LCPHCRRPFT PSPELVEQAL RESKLPPGDK DTWTFYQKVG CPKCSETGYL GRMAIYEVFK INEEMRNIIY KTQDLIDLNR AAERSGAWNL RASGWRKAVK GLTTHEEILS VTTLEE
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