Gene Emin_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0567 
Symbol 
ID6262787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp620511 
End bp620954 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID642611038 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875459 
Protein GI187250977 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTTACTTT AATAGAATTA CTTGTAGTTG TTCTTATTAT AGGCATACTT 
GCCGCTATAG CGTTGCCTCA ATATACCAAA GCGGTTGAAA AAAGCCGTTG GTCTGAGGCA
AAGATAATGG TAAAAGCTTT AAAGGACGCG CAGGACAGAT ATTTTTTGGC GACAGGCGAG
TATACCTCCA ACCTTACTGA TTTAGATATT GAAGTCCCCT CATCAACAAA ATATTTTACC
TATATTATGC ACACTTCTCC GTTACTACAT ATTGAGGCTA ATCGTACGGG GCAAAGCATA
TGGATGGTAA AATACGCCGG CACTGAGGAA ATATTTTGCG CCGCGGCAAA CGGCTCGGAA
GAAAACAAAA AACTGTGTAA AACAATAACA AGCAGAGAAG GCATTGCCTG CCCGGAGCCG
GGATATACCT GTTTCCCGAT ATAA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYTK AVEKSRWSEA KIMVKALKDA QDRYFLATGE 
YTSNLTDLDI EVPSSTKYFT YIMHTSPLLH IEANRTGQSI WMVKYAGTEE IFCAAANGSE
ENKKLCKTIT SREGIACPEP GYTCFPI