Gene Emin_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0265 
Symbol 
ID6262951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp281788 
End bp282288 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content42% 
IMG OID642610730 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875164 
Protein GI187250682 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.319115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG GATTCACGTT GATAGAACTT TTAGTGGTAG TTTTAATTAT CGGCATTTTG 
GCCGCTATTG CGCTGCCCCA ATATCTTAAA GCGGTTGAAA AATCACGCGC GGCGGAAGCG
TGGGTTATTA TAAAAAATAT GCATGACGCT TTGGAGCGCA CAAGGCTTAA CAGCGGCGTG
TACGCTAATG ATTTTGAAGT TTTAGATATT ACCTTTCAAG CTGATGAGGA CGCCTCCTTA
AAACACAGTG ACGACGTTAC AAACCCTATA AAAACAAAAA CTTTTGTTTT TCATCTTACC
AACGAGTGTA TTACGGCCGA GCGTGTGCCG GATAGAACCA AATATGCTTT AAGGCAATAT
CTTACGGAAG GCGCAAACGC TTTAAGAAAA GGCACCAGAG GCTGCGTTGC CTACGATGAT
AAAAATGCTG AGATTTGTGA ATCAATGGCG GGTGATTTAA GCGGCACGGA AAGCGGCGCT
TATTATTACA TGTTACAGTA A
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIALPQYLK AVEKSRAAEA WVIIKNMHDA LERTRLNSGV 
YANDFEVLDI TFQADEDASL KHSDDVTNPI KTKTFVFHLT NECITAERVP DRTKYALRQY
LTEGANALRK GTRGCVAYDD KNAEICESMA GDLSGTESGA YYYMLQ