Gene Emin_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0023 
Symbol 
ID6263514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp25155 
End bp26030 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content38% 
IMG OID642610486 
Productintegrase family protein 
Protein accessionYP_001874928 
Protein GI187250446 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGT TGGACTTTAA AAATTACCTT TCATTTGAAA GGCAGTTATC TAAAAACACA 
ATATACGCTT ATACAAATGA CGTAGGGGAT TTTTTTGCTT TCTGCGAGGA AAACAATACC
GCGCCGCAAA ACGTCCGTCC TGATTTTATA GACGAATATA TTTACCATTT AAAACAAAAA
GGGCTTTCTC CTAAAAGCGT TTTCAGAAAA ACGCAAGCCG TTAAAAGTTT TTATAAATAT
TTAATAATTA ACGGTGATAT AAAAGAGGAT CCGTGCCGTT TTTTGCTGTC CCCCAAGCTT
ACCCAAAAAA TACCGGAAAC TTTAACCAAA GAAGAAATTA GCCGTCTGTT ATCTTTCCCT
CCAAAAACAT TCGCGGAAAT ACGAACTCTT ACAATTTTGG AATTATTTTA CGCCTGCGGC
CTTCGTGTTA GCGAGCTTGT TTCTTTAAGG ATTGAAAGTG TTAATCTTAA AGATAAATGG
GTGCTTGCCT ATGGCAAAGG CGCCAAACAG CGTTTTATTC CCATTCATGA TCGTGCCGTA
AAAGTGTTGG AAATTTATTT GTCCGAAAGG GAAAAATATT TAAAAGGAAA GGAAAGCGCG
TCTGAAATTT TTATAAATAA AAACGGTAAA AAAATAAGCC GCATGAGCGT GTGGAAAGAT
GTTAATGACC TTGGCAGGCT TGCCGGGATA GAGCGTTCTT TACACCCGCA TTTATTCAGG
CACACTTTTG CGACACATTT GCTTATAGGC GGCGCGGATT TGAGAAGTTT GCAAGAAATG
CTTGGCCACG CAGATTTGCA GACAACGCAG ATTTATACTC ATTTAGACGT ACAGAGTTTA
AAAGAAAAAC ATAAAAAGTT TCATCCCAGG GGGTAG
 
Protein sequence
MDMLDFKNYL SFERQLSKNT IYAYTNDVGD FFAFCEENNT APQNVRPDFI DEYIYHLKQK 
GLSPKSVFRK TQAVKSFYKY LIINGDIKED PCRFLLSPKL TQKIPETLTK EEISRLLSFP
PKTFAEIRTL TILELFYACG LRVSELVSLR IESVNLKDKW VLAYGKGAKQ RFIPIHDRAV
KVLEIYLSER EKYLKGKESA SEIFINKNGK KISRMSVWKD VNDLGRLAGI ERSLHPHLFR
HTFATHLLIG GADLRSLQEM LGHADLQTTQ IYTHLDVQSL KEKHKKFHPR G