| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0003 |
|---|
| Symbol | |
|---|
| ID | 6263163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 2086 |
|---|
| End bp | 3195 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642610465 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_001874908 |
|---|
| Protein GI | 187250426 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0000000352181 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTA ATATAACTAA AGAAACTTTT TTGGAAGGAC TTTCTGTTGT TCAGGCCGGT
GTATCTTCAA GAGCTACATT ACCCATTCTT CACAATTTTC TTATGGAAAC TGAAAACGGT
AAAATTAAAC TTGTAAGAAC TGATATGGAA ATGGCTTCAA TACATTATAT AAAGGCCGAG
ATATTAGAAG AAGGATCAGT AACAATACCT TTAAAAGAAG TTTCCGATAT TTTAAAAAAC
CTTCCTAATG ATAAAGAAAT TAATTTAACT GTTGGTGAGG ATAATAAAGT TCACATTAAA
AGCGGTAAAT CAAAATTTTG GGTTATAGGA ACACCTAAAT CAGAATATCC TTTAATTCCG
GAAATAGATA AATCTAATCT TATTAATTTA AAAATAAAAG AAATTCAGGA AATGGTTGAA
AAAACAATAT TTTCCTCCTC AACACAGGAA ACGAGATATG TTTTAAACGG CCTTCTATGG
GTAAAAACGG GAAATAAATT TGAAGTTGTC GCCACCGATG GCAGAAGGCT TGCTTTGGCT
GTTGATACAA TTGAAAGCGA CACTAAAGAT TTTAAAATTA TTATTCCTAC TAAAATTTTA
AACGAGCTTT TAAGATTTTT CTCCATAAAT AAACCTTCTG AAGATGATAC TTTAGTATTA
AGCGTAGCTT CAAACCAGGT AAGTTTTAAT ATAAAAGAAA CAACTTATAT TTCCAGGCTT
ATTGAAGGTA ATTTTCCTAA TTATGAGCAG GTTATCCCCA ATAAAAAAGT AATGGGTTTT
TTATCTGATA CAAAAGAAAT TTTAGCCTCT ACAAAACGTG CTAGTCTTTG CGCAAACGAA
CTTGGCGGCA CGGTAAAATA TTCTTTAAAT AATAATGTTT TAAAAATAAC TTCCAATTCT
CAAAAAATGG ACTTTTCTGA CGAAATGAAA GTTGAATATA CAGCCGAACC TTTTGAAATA
TCTTTTAACC CACAATATGT TTTAGATGTG TTAAAAAATA TTTCCACGGA AAAAGTTGAA
TTTTCTTTTA TTAACGCGGC GCAGCCCGTG TTGATTGAGG AAATAAACAA TACAAAATTT
AAATACGTAA TAATGCCGGT GAGATCGTAA
|
|---|
| Protein sequence | MKINITKETF LEGLSVVQAG VSSRATLPIL HNFLMETENG KIKLVRTDME MASIHYIKAE
ILEEGSVTIP LKEVSDILKN LPNDKEINLT VGEDNKVHIK SGKSKFWVIG TPKSEYPLIP
EIDKSNLINL KIKEIQEMVE KTIFSSSTQE TRYVLNGLLW VKTGNKFEVV ATDGRRLALA
VDTIESDTKD FKIIIPTKIL NELLRFFSIN KPSEDDTLVL SVASNQVSFN IKETTYISRL
IEGNFPNYEQ VIPNKKVMGF LSDTKEILAS TKRASLCANE LGGTVKYSLN NNVLKITSNS
QKMDFSDEMK VEYTAEPFEI SFNPQYVLDV LKNISTEKVE FSFINAAQPV LIEEINNTKF
KYVIMPVRS
|
|---|
| |