Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_3120 |
Symbol | |
ID | 8417456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 3629429 |
End bp | 3629950 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645026100 |
Product | single-stranded nucleic acid binding R3H domain protein |
Protein accession | YP_003183451 |
Protein GI | 257792845 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000729653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000587752 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTGAAG AATTGGTTGA TGAGAAGCCT CTTGATGAGG AACCCGCTGA ACTGACCGAC GAGGATCTGG ATCGCATTGC CGATACGGCG ATCGGAGCGC TCCAGGATAT TCTCAAGTAC TTCGAGGTGG GCGAAGTGAC CATCGACGAG TACGAAGGCG ACGAAGGCGA GCTGATCCTC GACATCACGG GCGACGATCT GGCGGTGCTG ATTGGCCGTC ACGGCAAGAC GCTCGATGCT CTGCAGTTCC TCGTGTCGGC GATTACCGTG CGCACCATCG GGTTCCGTTA CCCGGTCATC GTGGACGTCG AAGGTTACAA GAGCCGTCAG CGCGAGAAGC TCGAATCGAT TGCCCGTTCT TCCGCGAACC GCGCAGCTAG CCAGAACCGC AGCATCAAGC TTCGTCCGAT GACGCCGTAC GAGCGTCGTA TCGTGCACAT CTGCCTGCGC GACGACGACC GTGTGGAGAC GGCATCTGAA GGCGAAGGCA GCGCCCGTCA TGTGGTGATT CTTCCTCGCT AA
|
Protein sequence | MAEELVDEKP LDEEPAELTD EDLDRIADTA IGALQDILKY FEVGEVTIDE YEGDEGELIL DITGDDLAVL IGRHGKTLDA LQFLVSAITV RTIGFRYPVI VDVEGYKSRQ REKLESIARS SANRAASQNR SIKLRPMTPY ERRIVHICLR DDDRVETASE GEGSARHVVI LPR
|
| |