Gene Elen_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3120 
Symbol 
ID8417456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3629429 
End bp3629950 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID645026100 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_003183451 
Protein GI257792845 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000729653 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000587752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAG AATTGGTTGA TGAGAAGCCT CTTGATGAGG AACCCGCTGA ACTGACCGAC 
GAGGATCTGG ATCGCATTGC CGATACGGCG ATCGGAGCGC TCCAGGATAT TCTCAAGTAC
TTCGAGGTGG GCGAAGTGAC CATCGACGAG TACGAAGGCG ACGAAGGCGA GCTGATCCTC
GACATCACGG GCGACGATCT GGCGGTGCTG ATTGGCCGTC ACGGCAAGAC GCTCGATGCT
CTGCAGTTCC TCGTGTCGGC GATTACCGTG CGCACCATCG GGTTCCGTTA CCCGGTCATC
GTGGACGTCG AAGGTTACAA GAGCCGTCAG CGCGAGAAGC TCGAATCGAT TGCCCGTTCT
TCCGCGAACC GCGCAGCTAG CCAGAACCGC AGCATCAAGC TTCGTCCGAT GACGCCGTAC
GAGCGTCGTA TCGTGCACAT CTGCCTGCGC GACGACGACC GTGTGGAGAC GGCATCTGAA
GGCGAAGGCA GCGCCCGTCA TGTGGTGATT CTTCCTCGCT AA
 
Protein sequence
MAEELVDEKP LDEEPAELTD EDLDRIADTA IGALQDILKY FEVGEVTIDE YEGDEGELIL 
DITGDDLAVL IGRHGKTLDA LQFLVSAITV RTIGFRYPVI VDVEGYKSRQ REKLESIARS
SANRAASQNR SIKLRPMTPY ERRIVHICLR DDDRVETASE GEGSARHVVI LPR