| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_3055 |
|---|
| Symbol | |
|---|
| ID | 8417390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3552145 |
|---|
| End bp | 3553833 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645026035 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003183387 |
|---|
| Protein GI | 257792781 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGC ATGCTTTCAG TCTGAAGACC ATCTATCTTG CCGCTCTGAC GGCGGTGTTC
GCCGTGTCGT TTTTCGCGTT CGTCGCGTTC GATTTGTACT CGCAGCAGCG GCAGACCGAG
CAGGCCATGC TGGAGGAAGC GCGCACGTTC GCGCGCGAGA TGGACGCGGT GTGGCAGTTC
ATGGACAACT CCCAAAGCAT CATCAACAAT TCGTCCAGCG GCGGCTACGA GTTCAAGGGC
CTGCACTGCT CGGTGGTGGG CAAGAGCGTC GGCCGGCTGT TCTCGGCGGG CAGCGACTAC
CACATCCGGT ACACGAACTT CGACCCGCGC AGCGAGCAGG ATATTCCCGA CGAGTTCGAG
ACGAAGGCGC TCGAGGCGTT CAACGCCGAT CGTTCGGTGA CCGAGTACTA CGGCGTGGCC
CCGTTCGACG GCGAGGATCG GTTCCGCTAC CTGCAAGCGC TCGAAGTGGA CGACAGCTGC
CTCGAATGCC ACGGCGAGCC GGTCGGCGAG CTCGACATCA CCGACCACGC GAAGGAAGGT
TGGACGCTCG AGTCGGTCGG CGGGGCAATC AGCATCGTGA TCCCCCTCGA TCAGCAGCAG
GCGGCCATGC GCGGCAACGT CATCCGAGAC ATGGCGTACT TCCTGTTGAT CACCGTGTTC
ATCGGCTTGG TCATCTTGGT GGTGACCACT GTGTTCGTGC TGCGGCCGTT GGGCGGCATG
CACGCGGCGT TCGGCGAGCT GAAACAGGGA CGCTTGGGCG CGTCCGTCAG CCAGCGCTTC
GCCGCGAAGG AAGTGAGGAG CCTCATCGCC GGCTTCAACG ACATGGCGGG CGAGCTGCGG
GGCATGTACG AGCATCTGGA ATCGCAGGTG CAGGAGCGTA CGGTGGACCT GCGCGAGGCG
AACGCCCTGC TGGAACGCCA GCGCGACAAG CTGGAGCAGC TTAACGCCGA CCTGGCGCAG
GAGACGCAGT TCAAGTCCGA CCTGCTAAGC ATGGTGAACC ACGAGCTGCG CACGCCGCTG
ACGTCCATCA TCACGTTCGC GCAGATATCG CGCGAGGCGT GCGACCCGGC CAACGAGCAC
GACCGTCGCT CGTGGGAGGA GATCGAGAAG AACAGTCGCA TCCTGCTCAA CATGATCAAC
AACATGCTGG ACATCGCGCG TTCGGATGCG GGCGGCATGC GCGCCACCTG CGAGCCGATG
GATTTGGGCG ACGTGGCGGC ATCGGTGAAG GGCACCATGG CTCCGCTGGC GCGCAAGTAC
GAGGTGTCGT TCAGCACGAA GGTGGCGTCG GACGTGCCCT TGGTCAACGG CGACTACGAG
AAGACGACGC GCATGCTGGA GAACCTGGCC AGCAACGCCA TCAAGTTCAC GCCCGACGGC
GGCTCCATCG AGCTGCGCGT GGCGTACGAC GCCGAGGCGC GCGTGGTGAC GTTGTCGATG
GTGGACGACG GCATCGGCAT CGCGCCCGAG GACCAGGCGC GCATCTTCGA GCGGTTCGTG
CAGGTGGACA GCACGTCCAC GCGTAAGTAC AACGGCAGCG GCCTCGGTTT GGCACTGGTG
CGCGAATACG GCGACATGCA AGGGTTCGCC GTGTCGGTGG AAAGCGAGCT CGGTCGCGGC
AGCAGGTTCG TCATCACGAT TCCCGCGAGC GCGATCGTGG GCGAGATAGA GGGGGAGGAC
GATGTATAA
|
|---|
| Protein sequence | MGKHAFSLKT IYLAALTAVF AVSFFAFVAF DLYSQQRQTE QAMLEEARTF AREMDAVWQF
MDNSQSIINN SSSGGYEFKG LHCSVVGKSV GRLFSAGSDY HIRYTNFDPR SEQDIPDEFE
TKALEAFNAD RSVTEYYGVA PFDGEDRFRY LQALEVDDSC LECHGEPVGE LDITDHAKEG
WTLESVGGAI SIVIPLDQQQ AAMRGNVIRD MAYFLLITVF IGLVILVVTT VFVLRPLGGM
HAAFGELKQG RLGASVSQRF AAKEVRSLIA GFNDMAGELR GMYEHLESQV QERTVDLREA
NALLERQRDK LEQLNADLAQ ETQFKSDLLS MVNHELRTPL TSIITFAQIS REACDPANEH
DRRSWEEIEK NSRILLNMIN NMLDIARSDA GGMRATCEPM DLGDVAASVK GTMAPLARKY
EVSFSTKVAS DVPLVNGDYE KTTRMLENLA SNAIKFTPDG GSIELRVAYD AEARVVTLSM
VDDGIGIAPE DQARIFERFV QVDSTSTRKY NGSGLGLALV REYGDMQGFA VSVESELGRG
SRFVITIPAS AIVGEIEGED DV
|
|---|
| |