| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2896 |
|---|
| Symbol | |
|---|
| ID | 8417227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3363171 |
|---|
| End bp | 3365423 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645025874 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_003183230 |
|---|
| Protein GI | 257792624 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGC AAAACAAACA ATCGCAGTTC CAGCAACCCA GCCCGAGGAC GACCATCATA
TCGGTAGTCC TGTTCATGCT GGTGGCTTTC TTCGTGGGCC AGCAGTTCTT GAACATGTCG
TCTGCCGGCG CCAAGCCTAC CGACCGTCTG ATCACGTCCG AGTTCGTGCA GGCCGTCGAG
CAGGATCGCG CGACGAAGGT GGTGTACAAC GCCGGCGACT ACACGGTGTC GGGCTCGTAC
TATCCCGCCA TCACGGCGGG CTCCACCGGC GCCGATGCGT TCAACGAAGC CTTCCAGGCG
CTCAACGCGC GCATGGCCAC GCTGAAGAAC CCCGAGACGG GCAAGGCGCT CGGCGGCGTG
GGCACCACCG ACATCAACGG GGCCACGCTG GGCGTGGAGC GCAACTTCAC GTCCACCTAT
TACGGCGGCT CGCTCGGCGA CCTCATGGCG GCGCATCCCA ACGTGCCGTA CGAGGTGGCG
CTGCCCAGCC CGTTCGTGGA GCTGCTCGGC ACGCTGCTGC CCTTCATCAT CATCGGCCTC
ATCCTGTTCT TCTTCTTCAA CCAGATGCAG AAGGCGAACA ACTCGCAGAT GAGCTTCGGC
AAGGCCAAGA CGAAGAAGTC CATCGAGGAG CGCCCCGACG TGAAGTTCTC CGACGTGGCC
GGCGTCGACG AGGCCGTCGA GGAGATGCAG GAGATCAAGG ACTTCTTGGC GAACCCGGCG
AAGTACCAGT CCATGGGCGC GAAGATCCCG CGCGGCTGCC TCTTGGTGGG CCCTCCGGGC
ACTGGTAAAA CCCTGCTCGC GCGCGCCGTC GCCGGTGAGG CGGGCGTGCC GTTCTTCAGC
ATTTCCGGCT CCGACTTCGT CGAGATGTTC GTCGGCGTGG GCGCGTCTCG CGTGCGCGAC
TTGTTCCAGC AGGCGAAGGA TGCCAGCCCG GCCATTATCT TCATCGACGA GATCGACGCT
GTCGGCCGCC AGCGCGGCAC GGGCCTCGGC GGCGGCCACG ACGAGCGCGA ACAGACGCTG
AACCAGCTGC TGGTGGAGAT GGACGGCTTC GAGAGCAACG ACTCGGTGGT GCTGATCGCT
GCTACGAACC GCGCCGACGT TCTGGACCCG GCGCTGCTGC GCCCCGGCCG CTTCGATCGC
CAGATCGTGG TGGACGCGCC CGACGTGAAG GGCCGCGAGA AGATCCTGCA GGTGCACTCG
AAGGACAAGC CCATCGGCAG CGACGTCGAC CTGTCGAAGG TGGCCAAGCT CACGCCGGGC
TTCACGGGTG CCGACCTGGC CAACCTCATG AACGAGTCGG CGCTGCTCAC CGCGCGTCGC
GGCAAGAAGA TCATCACGCA GCAGGAAGTG TCCGAGTCCA TGGAGCGCGT CATCGCCGGG
CCCGAGCGCA AGGGTCGCGT GCTGGACGAA CAGACGAAGC ACACCATCGC GTACCACGAG
AGCGGTCACG CCCTGGTCGG TCACCTGCTT CCGCACGCCG ATCCCGTGCA CAAGATCTCG
ATCATCTCGC GCGGCCGAGC GCTGGGCTAC ACGCTGTCCA TCCCCAAGGA GGACAAGGTG
CTCAACTCGC TCGGCGAGAT GCGCGACGAG TTGGCCGTGT TCATGGGCGG TCGCGTGGCG
GAGGAGATCT TCTGCGACGA CATCACCACG GGCGCATCGA ACGACCTCGA GCGCGCCACG
AAGATGGCCC GCGCCATCGT CACGCAGTAC GGCATGAGCG CCGAGCTGGG CACGCAGGTG
TTTGGCCAGC CGAACCACGA AGTGTTCCTG GGCCGCGACT ACGGCAACAC GCAGGACTAC
TCGGAGGAGA CGGCGAAGCG CATCGATGAC GAGGTCGCCC GCATCATGAA GGACGCGCAT
GATCGCGCCT ATGAGATTCT GGCAAGCCAT CGCGAGCAGA TGGATCTCAT GGCCAACGTG
CTGCTTGAGC GCGAAACGGT GGAAGGCGAG GCGTGCCTTG CCCTGCTGGA CAACACGTGG
GACGAGTACC TCAAGCACGA GGACGAGATC ATCGCGGCCA AGGAGGCCGA GGAGGCCGCC
GCGCGCGCCC GCGACGAGCA TCTGGCCGAC CCGAACTGGA AGGAAGAGCC GGTCGAGCCG
GGCGACCAGG ATCCGAATCC GCCGTACCGC GAGCCTGCGG AGGGCGACGG CGACGATGCG
CCCGCATCTG CTTCGTCGAC GTCGGACGAG GCGCCTGTCG ACGCTCCGGC TCCGCAAGCC
CCTGAGCAGA AAGGCGACGG CACCGAACGA TGA
|
|---|
| Protein sequence | MAQQNKQSQF QQPSPRTTII SVVLFMLVAF FVGQQFLNMS SAGAKPTDRL ITSEFVQAVE
QDRATKVVYN AGDYTVSGSY YPAITAGSTG ADAFNEAFQA LNARMATLKN PETGKALGGV
GTTDINGATL GVERNFTSTY YGGSLGDLMA AHPNVPYEVA LPSPFVELLG TLLPFIIIGL
ILFFFFNQMQ KANNSQMSFG KAKTKKSIEE RPDVKFSDVA GVDEAVEEMQ EIKDFLANPA
KYQSMGAKIP RGCLLVGPPG TGKTLLARAV AGEAGVPFFS ISGSDFVEMF VGVGASRVRD
LFQQAKDASP AIIFIDEIDA VGRQRGTGLG GGHDEREQTL NQLLVEMDGF ESNDSVVLIA
ATNRADVLDP ALLRPGRFDR QIVVDAPDVK GREKILQVHS KDKPIGSDVD LSKVAKLTPG
FTGADLANLM NESALLTARR GKKIITQQEV SESMERVIAG PERKGRVLDE QTKHTIAYHE
SGHALVGHLL PHADPVHKIS IISRGRALGY TLSIPKEDKV LNSLGEMRDE LAVFMGGRVA
EEIFCDDITT GASNDLERAT KMARAIVTQY GMSAELGTQV FGQPNHEVFL GRDYGNTQDY
SEETAKRIDD EVARIMKDAH DRAYEILASH REQMDLMANV LLERETVEGE ACLALLDNTW
DEYLKHEDEI IAAKEAEEAA ARARDEHLAD PNWKEEPVEP GDQDPNPPYR EPAEGDGDDA
PASASSTSDE APVDAPAPQA PEQKGDGTER
|
|---|
| |