| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2489 |
|---|
| Symbol | |
|---|
| ID | 8416813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 2913660 |
|---|
| End bp | 2915633 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645025470 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003182833 |
|---|
| Protein GI | 257792227 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTAA CGCGCAAGCA GATCGTCATG CTGGCCGTGC TGGTGTTCGG CACGTTCGTG
ACGGTTCTGA ACCAGACCGT CGTCGCCCCG GCGCTGCCGT CGGTCATGAC CGAGATGAGC
GTCGACGCCT CCATGGCGCA GTGGCTCACC ACCGGCTTCA CGCTGGTGAA CGCCATCATG
ATCCCCATCA CGGCTTTCTT GACGGACCGC TTCACCACCA AGCGGCTCTT CCTCGTGTCC
ATGGTTATCT TCACGTTGGG CAGCTTCCTT GCGGGCTGGG GTCCCAGCTT CGTCGTGCTG
CTGCTGGGCC GGCTCGTGCA GGCCGCCGGC GCGGGCATCC TCATGCCCCT TGTGATGACG
GTGCTCATGT GGACGTTCCC CGTGGACAAG CGCGGTACGG CCATGGGCCT GTTCGGCATC
GTCATCGCGT TCGGCCCCGC CATCGGCCCC ACCGTGGCGG GCGTCATCAT CGACCGCTAC
ACCTGGCACG ATATGTTCTA CATCATCACC GCGCTGTCGG CCGTCGTAGT GCTTATCGGC
GCGTTCGTGC TGCAGAAGGG CGGCGAAACG AAGAAGGACG TCACGCTCGA CGTGCCCTCC
GTCATCCTGT CGTCGCTGGG TTTCGGCGGC CTATTGTACG GCCTGTCCAC CATCGGCTCC
TACGGCCTGC GTGCCGACGC TATCGCCGGC ACGCTCGTTG GCGCGGTAGC GCTCGTGTTC
TTCTTCCGAC GCCAGCTGAA GATGGAGAAG CCCATGCTGC AGGTGCGCGT GCTGCAGAAC
CGCAAGTTCC TCATCGCCAC GATCATCGGC ATGTTGGTGC AAGGCGCGCT TTTGGCTGCA
GGCATCTTGG TGCCTATCTA CCTGCAGTCG CTCATGGGCT ACTCCGCCAC CGTGTCCGGC
CTCGTGTTGC TGCCCGGCGC CATCATCATG GGTGCCATGG GGCCCATCGC CGGCCGTCTG
TTCGACAAGC ACGGACCGCG CGTGCTGGCG CTCGTGGGCA TGGGCGTGCT CACGCTGACT
ACGTTCTGCT TCGCATTCCT GAGCACCGAA ACCGGCATCA TCACCTTGAC CCTTCTGTAC
ACCGTGCGCC TGTTCTCGCT GTCGCTGGTG AACATGCCCA TCACCACCTG GGGCATGAAC
GCGCTCGACA ACGAGCTGGT GAACCACGGC ACTTCGGTGA ACAACACGTT CCGCCAAGTG
GCGGGCTCGC TGGGCACCGC CATCATCGTT TCGGCCTCCA CTATCGCCAC GAACATGAGC
TCCCGGACGA TGACTCCCAC GCAAGCCAGC ATCTTCGGCA TCGACGTGGC GTTCGCCCTA
GCCGGCGCGC TGTGCCTCGT CGGCTTCGTC ATGGTCGTGG CGCTGGTGAA GAACAAACCG
GGCGAGGCCG CCGAGAAGGA TCGGGACAAC TCCCGCCGCA CGGTGCTGGA GTCCATCATG
AAGCGCGACG TGTACACGCT GCCCGCCAAC GCCACCGTGG CCGAAGCCAT GCAGGTGCTG
GTGGACCGGC ACATCAGCGC CGCCCCGCTG GTAGACGAAC AGGGCAAGGC CGTGGGCTTC
GTATCCGACG GCGATATCAT GCGCTACCTG TCGAAGCGAT CGCAGATGCT GATGGACCCC
GTGGTCATGA TCATGCAGAC CGTGGACGCC GACGGCGGCA ACCAGGACTT CGCCCGCAAG
CTCGACGAGC TCATGGGCAT GCCGGCGAAG AGCATCGGCG CGAAGGGCAT CATCGGCGTG
GACGTGCATG CCGACCTTCC CGAAGTGTGT CGCGTGTTGG GCGAGAACCA CTTGAAGAAG
GTGCCCGTGC TGGACGAGGG CCAGGTGGTG GGCGTGATCA ACCGCTCCGA CATCACGCAC
TACTCCATGC AGCAGTACCT GGCCGAGCGC GACGCCGAAG CGGCGTCGAA ACTGGAGCGC
TCCGAGGAAG CCGCCGCGCT CCCCGACGAC GAAGCGATGG CATCGTCCAT CTAA
|
|---|
| Protein sequence | MGLTRKQIVM LAVLVFGTFV TVLNQTVVAP ALPSVMTEMS VDASMAQWLT TGFTLVNAIM
IPITAFLTDR FTTKRLFLVS MVIFTLGSFL AGWGPSFVVL LLGRLVQAAG AGILMPLVMT
VLMWTFPVDK RGTAMGLFGI VIAFGPAIGP TVAGVIIDRY TWHDMFYIIT ALSAVVVLIG
AFVLQKGGET KKDVTLDVPS VILSSLGFGG LLYGLSTIGS YGLRADAIAG TLVGAVALVF
FFRRQLKMEK PMLQVRVLQN RKFLIATIIG MLVQGALLAA GILVPIYLQS LMGYSATVSG
LVLLPGAIIM GAMGPIAGRL FDKHGPRVLA LVGMGVLTLT TFCFAFLSTE TGIITLTLLY
TVRLFSLSLV NMPITTWGMN ALDNELVNHG TSVNNTFRQV AGSLGTAIIV SASTIATNMS
SRTMTPTQAS IFGIDVAFAL AGALCLVGFV MVVALVKNKP GEAAEKDRDN SRRTVLESIM
KRDVYTLPAN ATVAEAMQVL VDRHISAAPL VDEQGKAVGF VSDGDIMRYL SKRSQMLMDP
VVMIMQTVDA DGGNQDFARK LDELMGMPAK SIGAKGIIGV DVHADLPEVC RVLGENHLKK
VPVLDEGQVV GVINRSDITH YSMQQYLAER DAEAASKLER SEEAAALPDD EAMASSI
|
|---|
| |