Gene Elen_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2179 
Symbol 
ID8416501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2557860 
End bp2558564 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID645025166 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003182531 
Protein GI257791925 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA CGGTTCTCAT AGTCGAAGAC GATTCGGATA TTATCGAAAT CCTGAGCCTC 
TATCTATGCG GTAGCGACTA CCAAGTCGAA ACCGCTGCGA ACGGAAAGCT GGGACTCGAG
CTGCTTGAGC GCAAGTCCCC TTCCGTCATA CTCGTGGATT TGATGATGCC CGAAATGAAC
GGGTTTGACT TCATCAAGGA AGCTCGCTCA GTTTCGAACG CGCCCATCAT CATCATTTCG
GCGCGCAGTC AGCCCACCGA CAAGATGCTC GGCTTGGATT TGGGTGCCGA CGGGTACATC
ACGAAGCCGT TCGACCCGAT CGAAGTGCTG GCCTACATTC GCGCGGTTCT CAGACGCTGC
AATGCATTGT CCGCAAGCGG CCCAAGCAAC ATTTCACCAG ACGGTTCGGT CGTGCGCATG
GGCGCCATAG AATTCGACAA AGAGTCCTTG ATCGTTCGGA AGAACAGCAA CGTGGTTTCC
TTTACGGCCT CAGAATTGAA GATATTCAGC AAACTGTTCT CCTCGCCCGG CCGCGTGTAC
ACGAAGGCGC AATTGTACGA ACTGATCAGC GCTTCCTCGC ATGGCGGAGG CGAGGACAGC
ATCATGGTTC ACATATCCAA CATCCGCTCT AAGATAGAAG ACGATCCCAA CAATCCGGCG
CATATCGTTA CGGTTCGTGG ATTGGGATAT CGTTTTGAGG GCTGA
 
Protein sequence
MNETVLIVED DSDIIEILSL YLCGSDYQVE TAANGKLGLE LLERKSPSVI LVDLMMPEMN 
GFDFIKEARS VSNAPIIIIS ARSQPTDKML GLDLGADGYI TKPFDPIEVL AYIRAVLRRC
NALSASGPSN ISPDGSVVRM GAIEFDKESL IVRKNSNVVS FTASELKIFS KLFSSPGRVY
TKAQLYELIS ASSHGGGEDS IMVHISNIRS KIEDDPNNPA HIVTVRGLGY RFEG