Gene Elen_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2148 
Symbol 
ID8416470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2530199 
End bp2532226 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content65% 
IMG OID645025135 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003182500 
Protein GI257791894 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.770476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAC TTCGAGGAAA CCTCACTGAT AAGATGGAAG CCAATCCCGG CAAGGTGCAT 
TTCCGCCGGT GGAAGGCCAT GAGCATCGGA TCGCGCATCT CGCTCGTCGT GCTCATCCTG
ATCGTCATGA TCGCCGTGTT CGCCAACATC CTGGCGCCGC ACAACCCGCT TGAGATCTTC
ACGGCACGCC AAGCCCCCGA TGCCCAGTTC CTGTTCGGCA CCGACGACAA GGGCCGCGAC
GTGCTGTCGC GTATGATGTA CGGCGCGCGC TACTCGCTGA TCATCGGCCT GGGCGCCACC
GCCTTCGCCC TCGTGTGCGG CTCCATCATC GGCGCCGTCG CCGCCGTGGC GCGCAAATGG
GTGTCCGAGG TCATCATGCG CATCCTGGAC GTCATCATGT CCTTCCCCGG TATCGCGCTG
GCCGCCACGT TCGTGCTCGT GTTCGGCAAC TCGGTGCCCT CGCTCATCTT CGCGATCGGC
TTTTTGTACA TCCCGCAGAT CGCCCGCATC GTGCGCGCCA ACGTGGTGAG CGAGTACAAT
CAGGATTACG TGCGCGCCGT CGTCGTTTCC GGCGCCCGCG CCCCCTGGAT CCTCGTGAAG
CACGTCATCC GCAACTGCAT CGCCCCGGTC ATGGTGTTCA CCATCGTGCT GGTGGCCGAC
GCCATCGTGT TCGAAGCGTC GCTGTCGTTC ATCTCGGCCG GCATTCCCGA GCCCACGCCC
ACGTGGGGCA ACATCCTGTC CGACGCCCGC GGCGGCGTGC TTGCCGGTCG TTGGTGGCAG
GCGCTGTTCC CGGGTCTGGC CATCATGATC ACCGTGCTGT GCCTGAACAT CCTGTCCGAG
GGCATCACCG ATGCCATGGC TGCCGCGCCC AAGGCCCCGG TCAAGGCCGA TGACGCCGCC
GTCCGCGCGA ACCGCGAGGC CGACAAGCTC GTGGCCGACC CCACGCTGGC ATACGCCGCC
CAGGCGGAGA TGCTCGAACA GCGCCTCAGC GAGCTTCAGG CGATTGAGAA GACGCGCACC
GACCGCTTCG AGGCGCGCAC CGACGTGCCG CCTATTCTGG AAGTGAAGGA TCTGTGCATC
AAGTTCCCGC GCCACGGCGA CGTGAACGTG GTCGACCACG TGAGCTTCGT GGTGCGCCCG
CGCCAGACCA TGGGTCTTGT GGGCGAGTCC GGCTGCGGCA AGTCCATCAC CTCCCTTACC
ATCATGGGGC TGCTGGATCC GAAGGCGAAG GTGTCCGGCG AGATCCTCTA CGACGGCCAG
AACCTGCTGA ACATGGATCA GAAGCAGATG AACGCCTTGC GCGGTCGCGA AATCGCCATG
ATCTACCAGG ACGCGCTCTC TTCGTTGAAC CCGTCCATGC TGATCAAAGC CCAAATGAAG
CAGCTCACGA AGCGCGGAGG AACCCGCACG GCCGAGGAGC TGCTGGAGCT GGTAGGACTC
GATCCGAAGC GCACGCTTGA CTCCTACCCC CACGAACTGT CCGGCGGCCA GCGCCAGCGC
GTGCTCATCG CCATGGCGCT GACGCGCGAT CCGAAGCTCA TCATCGCCGA CGAGCCCACT
ACGGCTCTCG ACGTGACCGT GCAGAAGCAG GTCATCGACC TGTTGAACAA GCTGCAGAAG
GAGCTGGGCT TCGCGATGGT GTTCGTGAGC CACGACCTGG CGCTCGTCGC CGAGGTGGCC
AACTCCATCA CGGTCATGTA CGCCGGCCAG GTGGTGGAGC AGGGCCCCGT GTCCGACATC
CTGTGCCATC CCGTGCACGA ATACACCCGC GGTCTCTTGG GTTCGGTGCT GTCCATCGAA
GCCGGCGGAA CGCGCCTGCA CCAGGTGCCC GGCAGCGTCC CCAGCCCGAA AGACTTCCCC
GAGGGCGACC GCTTCACGCC GCGCTCCAGC CATCCTGACA AGGTGTCCCA GCTGCGCCCC
GTGCTCAAGC GCGTGTCCGA CTCCGACCAC TACTACGCCG AGCTGCCCGA CAGCGAGCTC
AAGCGCCTCG GCATCAAACC GTACGTCCCA GGAGGTGCCA TCATATGA
 
Protein sequence
MVKLRGNLTD KMEANPGKVH FRRWKAMSIG SRISLVVLIL IVMIAVFANI LAPHNPLEIF 
TARQAPDAQF LFGTDDKGRD VLSRMMYGAR YSLIIGLGAT AFALVCGSII GAVAAVARKW
VSEVIMRILD VIMSFPGIAL AATFVLVFGN SVPSLIFAIG FLYIPQIARI VRANVVSEYN
QDYVRAVVVS GARAPWILVK HVIRNCIAPV MVFTIVLVAD AIVFEASLSF ISAGIPEPTP
TWGNILSDAR GGVLAGRWWQ ALFPGLAIMI TVLCLNILSE GITDAMAAAP KAPVKADDAA
VRANREADKL VADPTLAYAA QAEMLEQRLS ELQAIEKTRT DRFEARTDVP PILEVKDLCI
KFPRHGDVNV VDHVSFVVRP RQTMGLVGES GCGKSITSLT IMGLLDPKAK VSGEILYDGQ
NLLNMDQKQM NALRGREIAM IYQDALSSLN PSMLIKAQMK QLTKRGGTRT AEELLELVGL
DPKRTLDSYP HELSGGQRQR VLIAMALTRD PKLIIADEPT TALDVTVQKQ VIDLLNKLQK
ELGFAMVFVS HDLALVAEVA NSITVMYAGQ VVEQGPVSDI LCHPVHEYTR GLLGSVLSIE
AGGTRLHQVP GSVPSPKDFP EGDRFTPRSS HPDKVSQLRP VLKRVSDSDH YYAELPDSEL
KRLGIKPYVP GGAII