| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2143 |
|---|
| Symbol | |
|---|
| ID | 8416465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2521868 |
|---|
| End bp | 2525410 |
|---|
| Gene Length | 3543 bp |
|---|
| Protein Length | 1180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645025130 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_003182495 |
|---|
| Protein GI | 257791889 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.955322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAG AATTCAAATC TATGGACGGC AACAACGCCG CCGCGTACGT CTCCTATGCG
TTTACCGAGG TGGCGGGCAT TTACCCGATC ACTCCGTCGA GCCCCATGGC CGACCTGGTG
GACCAGTGGT CCGCTGCCGG CAAGAAGAAC ATCTTCGGCA CCACGGTGAA GGTGTGCGAG
ATGCAGTCCG AGGGCGGCGC CGCCGGCGCG GTGCACGGCT CGCTGGCCGC AGGCGCGCTG
ACCACCACCT ACACGGCTTC CCAGGGTCTG CTCCTCATGA TCCCCAACAT GTACAAGATG
GCCGCCGAGC AGCTGCCGTG CGTGTTCCAC GTCAGCGCGC GCACGCTGGC CACCCAGGCG
CTTTCCATCT TCGGCGATCA TTCCGACGTC ATGGCGTGCC GCCAGACGGG CTTCGCCATG
CTGGCCGAGA CGAACGTGCA GGAGGTCATG GACCTGTCGG CCGTGGCGCA CCTGTCCGCC
ATCAAGGGCC GCATTCCTTT CATCAACTTC TTCGACGGCT TCCGCACCTC CCACGAAGTG
CAGAAGATCG CCGTGTGGGA CTACGAGGAT CTCGCCGACA TGTGCGACAT GGAGGCCGTG
AGCGAATTCC GCGAGCATGC GCTGAACCCC GAGCGTCCGG CCATGCGCGG CAGCCACGAG
AACGGCGACA TCTTCTTCCA GCATCGCGAG GCGTGCAACG GCGTGTACGA TGCGCTGCCC
GCCATCGTCG AGGACTACAT GCACCAGGTG AACGCCAAGC TGGGTACGAA CTACGAGCTG
TTCAACTACT ACGGCGCGCC CGACGCCGAC CGCGTGATTG TGGCCATGGG CTCGTTCTGC
GACGTGGTCG AGGAGGTCGT GGACTATCTG AACGCCCAGG GCCAGAAGGT GGGCCTCGTG
AAGGTGCGCC TGTATCGCCC GTTCGTGAGC GAGAAGTTCA TGGCCGCGCT GCCTGCGACG
GTGCAGAAGA TCGCGGTCAT GGACCGCACG AAGGAGCCGG GCGCGCTCGG CGAGCCCTTG
TACATGGACG TCATCAACGC GCTCGCGCAC GAGGGCCGCG CCGATCTCAC GGTGGTAGGC
GGCCGCTACG GCCTGGCGTC GAAGGACACC CCGCCGTCTT CGGTGTTCGC CATCTACCAG
GAGCTGGAGA AGGACGCGCC GGCGCGCGAG TTCACCGTGG GCATCGTCGA CGACGTGACG
AACCTGTCGC TTCCCGAGGA TCCGAACAGC CCGAACACCG CAGCCGAGGG CACCATCGAG
TGCAAGTTCT GGGGCCTCGG CGGCGACGGC ACGGTGGGCG CGAACAAGAA CTCCATCAAG
ATCATCGGCG ACCACACCGA CAAGTACGTG CAGGCATACT TCCAGTACGA CTCGAAGAAG
ACCGGCGGCG TGACCATCAG CCACCTGCGC TTCGGCGACT CGCCTATCCG CAGCACCTAC
TATGTGAACA AGGCCGACTT CGTGGCTTGC CACAACCCCT CCTACGTCAC CAAGGGCTTC
CGCATGGTGA ACGACGTGAA GCCGGGCGGT GCGTTCATGA TCAACTGCCA GTGGACGCCC
GAGGAGCTTG AGCACCACCT GAACGCCGAG GCGAAGCGCT ACATCGCCAA CAACGACATC
AAGCTGTACA CCATCAACGC CATCGACCTC GCCGCTGAGA TCGGCATGGG CAAGCGTACG
AACACCATCC TGCAGTCGGC GTTCTTCACG CTGGCCAACG TGATCCCGCA GGACGAGGCG
CTGCAGTACA TGAAGGACGC CGCCACGAAG TCCTATATGA AGAAGGGTCA GGACGTCGTC
GACATGAACC ATCGCGCCAT CGACGCGGGC GCCACGGCGT TCGTGCAGGT GGAGGTGCCT
GCAAGCTGGG CGAACGCTGT GGACGAGAAC GAGGCTCCGA CGCTCGAGGG TCGTGCCGAA
GTGGTGAAGA TGGTGCGCGA GATCATGGAG CCGGTCGGCC GTATGGACGG CGACCGTCTG
CCGGTGTCGG CGTTCGTCGA CCACGCCGAC GGCCAGTTCG AGCAGGGCGC GGCCGCCTAC
GAGAAGCGCG GCGTGGCTGT GAGCGTGCCC GCGTGGGATG CCGCCACGTG CATCCAGTGC
AACCAGTGCG CTTTCGCGTG CCCGCATGCC ACCATCCGCC CGTTCGCCCT CACCGAGGAA
GAGGCTGCTG CGGCTCCCGC CGCTACCGTC ATGGTGCCTG CGAAGGGCAA GGCCGCTGCC
GGCCTGCAGT ACACGCTGGC CATCTCGCCG TTCGACTGCA TGGGCTGCGG CGTGTGCGTG
AACGTGTGCC CGTCCGACTC GCTGGCAATG GTATCCACGG AAAGCCAGCT GGCGCAGCAG
GACGTGTTCG ACTACTGCGT GGACAACGTG TCCGACAAGC CCGCGCTCGA GGATGCCACG
GTCAAGGGCA GCCAGTTCAA GCAGCCGCTG CTGGAGTTCT CCGGCGCCTG CGCCGGTTGC
GCCGAGACGG CGTACGCCAA GCTGGTCACC CAGCTGTTCG GCGATCGCAT GTACGTCGCG
AACGCCACGG GTTGCTCGTC CATCTGGGGC GGTCCGGCCG CTACGTCGCC GTATACGGTG
AACGCAGAGG GTCGCGGGCC TGCGTGGTCG AACTCCCTGT TCGAGGACAA TGCCGAGCAC
GGTCTGGGCA TGTTGCTGGG TCACGAGGCG GTGCGTGACC GCCTGGTCGG CAAGTTGGAA
GCCATGGCAG CTAACGACAA GACGCCGGCT GAGACCAAGG ATCTTATCGC GGCGTACCTC
GACACCATGG CCGATGGCGA GGCGAACGCC AAGGCCGTCG AGGCGCTCGT TCCCGCGCTC
GAGGCTGCTG TCGAGAACGG TTGCCCGGAG GCGCCCGAGA TCCTGCAGAA CAAAGAGTAC
CTGAACAAGA AGTCCGTCTG GATCTTCGGC GGCGACGGCT GGGCCTACGA CATCGGTTAC
GGCGGCCTCG ACCACGTGCT GGCATCCGGC GAGGACGTGA ACGTGTTCGT GTTCGACACC
GAGGTGTACT CCAACACCGG CGGTCAGGCT TCGAAGGCAA CCAACATCGG CCAGGTCGCC
CAGTTCGCGG CCGCGGGCAA GGACGTCAAG AAGAAGAGCC TCACCGAGAT CGCGATGGCG
TACGGCTACG TGTACGTGGC GCAGGTTGCT ATGGGCGCCA AGCCGGCCCA GACCATCAAG
GCCATCGCCG AGGCCGAGGC CTATCCCGGA CCGTCGCTGA TCATCGGCTA CTCGCCGTGC
GAGATGCACT CCATCAAGGG CGGCATGGCG AACTGCCAGG ACGAGATGAA GAAGGCCGTC
GACTGCGGCT ACTGGAACCT GTTCCGCTTC AACCCGGCCG CCGAGCCCGG CAAGAAGTTC
ACGCTGGACT CCAAGGAGCC CGCGGGCGGC TACCAGGAGT TCCTCATGAA CGAAGCGCGT
TATAGCCGTT TGACCCGCGA GTTCCCTGAG CGCGCCAGCG AGCTGTTCGA GCGCAACGAG
AAGGCGGCCA TGGACCGCTA CGAGCACCTG CTCAAGCTCA AGGACGTCTA CGCCGAAGCG
TAA
|
|---|
| Protein sequence | MTREFKSMDG NNAAAYVSYA FTEVAGIYPI TPSSPMADLV DQWSAAGKKN IFGTTVKVCE
MQSEGGAAGA VHGSLAAGAL TTTYTASQGL LLMIPNMYKM AAEQLPCVFH VSARTLATQA
LSIFGDHSDV MACRQTGFAM LAETNVQEVM DLSAVAHLSA IKGRIPFINF FDGFRTSHEV
QKIAVWDYED LADMCDMEAV SEFREHALNP ERPAMRGSHE NGDIFFQHRE ACNGVYDALP
AIVEDYMHQV NAKLGTNYEL FNYYGAPDAD RVIVAMGSFC DVVEEVVDYL NAQGQKVGLV
KVRLYRPFVS EKFMAALPAT VQKIAVMDRT KEPGALGEPL YMDVINALAH EGRADLTVVG
GRYGLASKDT PPSSVFAIYQ ELEKDAPARE FTVGIVDDVT NLSLPEDPNS PNTAAEGTIE
CKFWGLGGDG TVGANKNSIK IIGDHTDKYV QAYFQYDSKK TGGVTISHLR FGDSPIRSTY
YVNKADFVAC HNPSYVTKGF RMVNDVKPGG AFMINCQWTP EELEHHLNAE AKRYIANNDI
KLYTINAIDL AAEIGMGKRT NTILQSAFFT LANVIPQDEA LQYMKDAATK SYMKKGQDVV
DMNHRAIDAG ATAFVQVEVP ASWANAVDEN EAPTLEGRAE VVKMVREIME PVGRMDGDRL
PVSAFVDHAD GQFEQGAAAY EKRGVAVSVP AWDAATCIQC NQCAFACPHA TIRPFALTEE
EAAAAPAATV MVPAKGKAAA GLQYTLAISP FDCMGCGVCV NVCPSDSLAM VSTESQLAQQ
DVFDYCVDNV SDKPALEDAT VKGSQFKQPL LEFSGACAGC AETAYAKLVT QLFGDRMYVA
NATGCSSIWG GPAATSPYTV NAEGRGPAWS NSLFEDNAEH GLGMLLGHEA VRDRLVGKLE
AMAANDKTPA ETKDLIAAYL DTMADGEANA KAVEALVPAL EAAVENGCPE APEILQNKEY
LNKKSVWIFG GDGWAYDIGY GGLDHVLASG EDVNVFVFDT EVYSNTGGQA SKATNIGQVA
QFAAAGKDVK KKSLTEIAMA YGYVYVAQVA MGAKPAQTIK AIAEAEAYPG PSLIIGYSPC
EMHSIKGGMA NCQDEMKKAV DCGYWNLFRF NPAAEPGKKF TLDSKEPAGG YQEFLMNEAR
YSRLTREFPE RASELFERNE KAAMDRYEHL LKLKDVYAEA
|
|---|
| |