| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2100 |
|---|
| Symbol | |
|---|
| ID | 8416418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2470301 |
|---|
| End bp | 2471803 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645025083 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003182452 |
|---|
| Protein GI | 257791846 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00116417 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA CCTGTACCGA ACTGTTCGCA GGTATCGACT GCACCATCCT CGGCAACGCC
GACGACGAGG TGAACGGTAT CGCCTACCGC AGCGACCGGG TGCAACCCGG CGACGCGTTC
TTCTGCGTGG TAGGCATGAC GACGGATGGG CACTCGTTCG CCCAGGACGC CATCGATCGG
GGCGCGAAAG TGCTCGTGGT CGAGCGCAAG GTGTACCTGG CCGACGCTAC GGACGTCACG
GAGATCGTGG TGAAGGATAC GCGCAAGGCC ATGGCGGCCG CGGCGGCGAA CTTCTACGAC
CATCCTTCCA AGGACATTGC GCTGGTGGGC ATCACCGGCA CCAACGGCAA GACCACCACG
ACCTACCTGG TAGAGCACAT CGCGCGGGTA GCGGGGAAGC GCACGGGCGT CATCGGAACC
GTGGGCATCC GCATCGGCGA CGAGGCCGAG AAATCGGCTC ATACCACGCC GGAATCGCCC
GATTTGCAGC AGCTGTTCGC CCGCATGCGC GATGCGCGCT GCGACGTCGT GGCCATGGAG
GTGAGCTCTC ATGCGCTCGA CCTCGATCGC ACGTGGGACG CCGCATTCGC CGTTACGGCG
TTCTCCAACT TGACGCAGGA TCACCTGGAC TACCATCACA CGTTCGAGGC CTACTTCGAG
GCGAAGGCGC GCCTGTTCTC GAAAGATTAT CCGGCCAAGC GCGTGATCTG CATCGACGAC
AAGTGGGGCA AAGAGCTGCT GCGGCGTTGC TCGGTTGCCG AAGACAGCGT GGTCACGACG
GGCTTCGATC CTTCCGCGCA GATACATCCC GTGGACGTGC AGTATGCTCC TACCCACACC
ACCGTCACGC TCGACGTGCG CGGCAGCTTG CATACATTCG ACTACCCGCT CGTGGGCAAG
TTCAACGTGG AGAACGTCAT GTGCGCCTTC GGCATCGGGC TGCAGCTGGG CTTCCCGGCC
GAGACCATCG TCGAAGCGCT CGAGGAGGCG CCGCAGATCC CGGGTCGTTT GGAGCGCGTG
AGCGCGCCGA ACACGGGCGG CGTGTCGGTG TTCGTGGACT ACGCCCACAC GCCCGACGCG
CTGGAGAAGG CGCTCGCGTC CATCATGGCG CTCACGCCCG GCCGCACCGT CTGCGTGTTC
GGCTGCGGCG GCGACCGCGA TGCCAGCAAG CGTCCCATCA TGGGCAAGGC CGCCCTGGCG
GCCGACCATG CGGTGGTGAC GTCGGACAAC CCGCGCACCG AAGATCCGCA GGCCATCATC
GAGGACATCG TGAGCGGAAT GAGCTCGGGA GCCGGCCGCT TCGAAGTGGA GGCCGACCGT
CGCGCCGCCA TCGCGCGCGC CATCGCACAG GCGAAGCCGG GCGACTCGAT TCTCATCGCG
GGCAAGGGCC ACGAGGACTA TCAGCTCGTG GGCGACCAAG TGCTCTCGTT CGACGATCGC
ATCGTGGCCG CCGAGGAGCT CGCGCGTGCG TTCGGCGACG AACCCGCAGG CGAGGATCGA
TAG
|
|---|
| Protein sequence | MGKTCTELFA GIDCTILGNA DDEVNGIAYR SDRVQPGDAF FCVVGMTTDG HSFAQDAIDR
GAKVLVVERK VYLADATDVT EIVVKDTRKA MAAAAANFYD HPSKDIALVG ITGTNGKTTT
TYLVEHIARV AGKRTGVIGT VGIRIGDEAE KSAHTTPESP DLQQLFARMR DARCDVVAME
VSSHALDLDR TWDAAFAVTA FSNLTQDHLD YHHTFEAYFE AKARLFSKDY PAKRVICIDD
KWGKELLRRC SVAEDSVVTT GFDPSAQIHP VDVQYAPTHT TVTLDVRGSL HTFDYPLVGK
FNVENVMCAF GIGLQLGFPA ETIVEALEEA PQIPGRLERV SAPNTGGVSV FVDYAHTPDA
LEKALASIMA LTPGRTVCVF GCGGDRDASK RPIMGKAALA ADHAVVTSDN PRTEDPQAII
EDIVSGMSSG AGRFEVEADR RAAIARAIAQ AKPGDSILIA GKGHEDYQLV GDQVLSFDDR
IVAAEELARA FGDEPAGEDR
|
|---|
| |