Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2015 |
Symbol | |
ID | 8416326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2362355 |
End bp | 2363029 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645024992 |
Product | putative two component transcriptional regulator, winged helix family |
Protein accession | YP_003182368 |
Protein GI | 257791762 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0839248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000000188648 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCGCA AGCAGGTGAT ATTCGTCGCG GACAGCCTCG ACAACGCGCA TAAGTTCCAG CAGGTGCTGT CGGGTTTGGA CGTGGACGTG GCAGCGGGGT CGTCCGCCCA GTTCAAGAAG CTGCTCGGGC AGCATCCCGC CTGCGACCTC GTCGTGTACG AGGCGCGCGG CGGCGCGTCG GAGGACGTGG CCGGCATCGA GGCGCTGCTG CTCGAGGACA ACGCGGCGTC GCTGCTCGTC ATCGTGGGGG AGGACCAGCT CGTCCGCTTC CGGCTGCCCG TGCAGGTGAA GAGCGACTTC GTGATGCGCG GCGCATCGCC TGAGGAGTGC GCGGCCCGCA TCCGCCAGCT GCTGTGGCCC GGCAACGAGG CCGCCACCTC GGACTGCCTC GCCGTGGAGA ACATGACCGT GAACCTGGCC ACCTACCAGG TGACGGTGGG CGGCGAGCCG CTCGACCTCA CGTACCTCGA GTACGCGCTG CTGGCCTTCC TCGTCACGCA CCCCTCGCGC ACCTACTCGC GCGACGCGCT GCTGCGCCGG GTGTGGGGCT TCGACTACTA CGGCGGCTCG CGCACGGTGG ACGTGCACGT GCGGCGCATC CGGGCGAAGC TGGGCCCCGA GCTCGCCCAG CATCTGGAAA CGGTGCGCGG CGTCGGCTAC CTGTGGAGCG CGTAG
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Protein sequence | MQRKQVIFVA DSLDNAHKFQ QVLSGLDVDV AAGSSAQFKK LLGQHPACDL VVYEARGGAS EDVAGIEALL LEDNAASLLV IVGEDQLVRF RLPVQVKSDF VMRGASPEEC AARIRQLLWP GNEAATSDCL AVENMTVNLA TYQVTVGGEP LDLTYLEYAL LAFLVTHPSR TYSRDALLRR VWGFDYYGGS RTVDVHVRRI RAKLGPELAQ HLETVRGVGY LWSA
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