Gene Elen_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2005 
Symbol 
ID8416316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2351626 
End bp2352879 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID645024982 
ProductChloride channel core 
Protein accessionYP_003182358 
Protein GI257791752 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000738344 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGGGG CTCAGCTTGC CAACCGAACG CTGTTCGTCG CTTCGGTGAT CGTGACCGGC 
GCCATCGCCG GCGCGTTCGT GTGGCTGCTC TTGTTCGCCA TGAACCTGGG CATCACGTTC
ATCTGGGACC GGCTGCCCGC GCATTTCGGC CCGTACTTCC CCTTGGCCGC CTGCCTGGTG
GGCGGCCTGG TCATCGGGCT GTTCGCCAAG AAGTTCGGAT CGTATCCCGA AGACTTGAAC
CAGGTGATGG CGAAGGTGAA GCGCGACGGC CGCTACGACT ACGACAAGCT GGGCGTCATG
TCCGTTTCCG CGCTGCTGCC CCTGTTCTTC GGCGGGTCGG TAGGCCCCGA GGCGGGCCTC
ACCGGGGCGG TCGCGGGCAT CTGCACGTGG GTGGGCGATC GCATGAAGCG CTTCGGCTCG
GACTTCCAGC AGCTCACGTC GGTCGGCACC ATGGCGGCGC TGTCGGCCAT CTTCACCGCG
CCCCTCTTCG GGTTCGCCGC GCCGCTGTAC GACGACGGCG ACGAGGCGAA GGGCGCGCAG
GCAGCCATCA CGCTGCCGAA GTCGTCGAAG ATCGTCGTGT ACCTGTGCGC CATCGCTGGT
GCGCTGGCGG CTTTCCTCGG ACTGGGCGCG CTGTTCGGCG GCGGGCTGTC GCTGCCTCGT
TTCACCGACA TCCACGTGGG AGCGACCGAG CTTCTGTGGC TCGTGCCGCT CGCGCTGGTG
GGCGCGGCAG GCGGTTGGCT GTTCTGTGCG TTCGACGGCC TGTTCGAGCG CCTGTCCGAA
CGCATGGGAG AGCGTCCCGT GGCAAAGGCG CTCATCGCCG GGCTCGTGCT GGCGCTCATG
GGCATCGCCT TGCCGTTCAC GATGTTCGCC GGCGAGACGC AGGCCGAGCA GCTGGGAGAG
GTCTGGGGCA CCATGACGGC GTTCGCGCTT TTGGCCACGG GCTTCGGCAA GGTGCTCGTC
ACGCCTTTGT GCATCCGCTT CGGCTGGCGC GGCGGCCACT TCTTCCCCGT CATCTTCGCC
GGCATCTCCA TCGGCTACGG CATGGCCATG CTCACCGGCG CCGACCCCGT GTTCTGCCTG
TGCGCAAGCA CGGCCGCGCT CGTGGGAGGC GTCATGCGCC AGCCGCTCAT GACCGTGCTG
CTGCTGTTCC TCTGCTTCCC CGTGAAGGGC ATCGTCGTCA TGCTGGCCGC CGCGGCCCTC
GGCGCCGCCG TCCCGCTGCC GAAAGCCTTG CGCGCCGAGC AAGCGGAAGG TTGA
 
Protein sequence
MKGAQLANRT LFVASVIVTG AIAGAFVWLL LFAMNLGITF IWDRLPAHFG PYFPLAACLV 
GGLVIGLFAK KFGSYPEDLN QVMAKVKRDG RYDYDKLGVM SVSALLPLFF GGSVGPEAGL
TGAVAGICTW VGDRMKRFGS DFQQLTSVGT MAALSAIFTA PLFGFAAPLY DDGDEAKGAQ
AAITLPKSSK IVVYLCAIAG ALAAFLGLGA LFGGGLSLPR FTDIHVGATE LLWLVPLALV
GAAGGWLFCA FDGLFERLSE RMGERPVAKA LIAGLVLALM GIALPFTMFA GETQAEQLGE
VWGTMTAFAL LATGFGKVLV TPLCIRFGWR GGHFFPVIFA GISIGYGMAM LTGADPVFCL
CASTAALVGG VMRQPLMTVL LLFLCFPVKG IVVMLAAAAL GAAVPLPKAL RAEQAEG