Gene Elen_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1779 
Symbol 
ID8416083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand- 
Start bp2085384 
End bp2086385 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID645024750 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003182133 
Protein GI257791527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AAGTAGGCAT TAACGGATTC GGTCGCATCG GCCGCCTGGC GTTCCGCGCG 
ATGGTGAACG ATCCCGAGAT CGAGGTTGTG GCAGTGAACG ACCTCGGCGA CATTCCGACG 
ATGGCCCACC TGCTCAAGTA CGATTCCATC CACGGGCGCG CCTTCGACAC GGTCGAGGTC 
ACCGAGGACG GCTTCGTGGC CGACGGCCAT GCGGTCAAGG TGCTCTCCGA GCGCGAGCCC 
GCCAACCTCC CCTGGGGCGA GCTGGGCGTC GACGTCGTCG TCGAGTCCAC CGGCTTCTTC 
ACCGACGGCA CGAAGGCCAA GGCGCACCTT GACGCGGGCG CCAAGAAGGT CGTCATCTCC 
GCGCCGGCCA AGAACGAGGA CATCACCATC GTCATGGGCG TGAACGACGA CCAGTACGAT 
CCCGAGAAGC ACAACATCAT CTCGAACGCC TCGTGCACGA CGAACTGCCT GGCCCCCTTC 
GCGAAGGTGC TCATGGACAA CTTCGGCATC AAGCGCGGCT ACATGAACAC GATCCACTCC 
TACACGAACG ACCAGAAGAT CCTCGACCTT CCCCATAAGG ACCTGCGTCG CGCCCGCGCG 
GCCGCCATGT CGATGATCCC CACCACCACG GGCGCCGCCC GCGCGGTGTC GCTGGTGCTG 
CCCGAGCTCA AGGGCAAGCT GGACGGCTTC GCCACCCGCG TTCCCACGCC GGACGGATCG 
ATGGTCGACC TCACCGTGGA GCTTGAGAAG GACGCCACGG CCGATGAGAT CAACGCCGCG 
ATGAAGGCCG CCGCCGAGGG CCCGCTCAAG GGCATCCTGG AGTACACCGA GGATCCGATC 
GTCTCCATCG ACATCGTGGA TAACCCGCAC TCCTCCATTT TCGACAGCAA GCTGACCATG 
GTGCTGGGCG GCGAGGGCAA CTTCGTCAAG TGCATCTCCT GGTACGACAA CGAGTGGGGC 
TACTCGAACC GTGTGAAGGA CTTGGTGAAG ATCCTTCTTT AA
 
Protein sequence
MAIKVGINGF GRIGRLAFRA MVNDPEIEVV AVNDLGDIPT MAHLLKYDSI HGRAFDTVEV 
TEDGFVADGH AVKVLSEREP ANLPWGELGV DVVVESTGFF TDGTKAKAHL DAGAKKVVIS 
APAKNEDITI VMGVNDDQYD PEKHNIISNA SCTTNCLAPF AKVLMDNFGI KRGYMNTIHS 
YTNDQKILDL PHKDLRRARA AAMSMIPTTT GAARAVSLVL PELKGKLDGF ATRVPTPDGS 
MVDLTVELEK DATADEINAA MKAAAEGPLK GILEYTEDPI VSIDIVDNPH SSIFDSKLTM 
VLGGEGNFVK CISWYDNEWG YSNRVKDLVK ILL