Gene Elen_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1743 
Symbol 
ID8416042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2050958 
End bp2051602 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID645024709 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003182097 
Protein GI257791491 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.370009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.039988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAG TAATGCTGGC GGACGACCAC GAAGTGGTAC GCGCGGGTTT CAGGATGATA 
CTCGAGCAGG ACCCCGACGT GCGGGTGGTG GCCGAGGCAG CCGACGGCGC GCAGGCTTAC
GCCATCGTGG CGCGCGAGAA ACCGGACATC CTGCTCATGG ACATCTCCAT GCCCCCGGGG
CAGAGCGGGC TGGTGGCCTG CGAGAAGATC GCGAAGGACT TCCCCGGCAC GAAGGTGGTC
ATCCTCACGA TGTTCGCCGA ACCGGAGTAC CTCTTCTACA CGCTACGCGG GGGAGCGGCG
GGCTACGTGC TGAAGAACTC GACGTCGGAA GAGCTGATCG CCGCCGTTCA TGCGGTGGCC
GAGGGCGGCA GCTACATCCA TCCGAAGATG ACGGCCATGC TCACCAAGCA GCTTGTGGCC
GGAGGAGAGG AAGAGGATCG CTCCTACCAG CAGCTCTCGA ACCGCGAGCT GGAGATCCTC
CAGCTTCTGG CCAAGGGCTT CACGAACAAG GAGATATCCG AGCAGATATT CCTCTCGGTC
AAGACGGTGG AGGCCCACCG TTCGAAGATA TACCAGAAGC TGGGCCTGAA GACCCGCGCC
GATTTGGTGG ACTACGCCCT CAGGCACAAG CTGCTGAACG TGTAA
 
Protein sequence
MIRVMLADDH EVVRAGFRMI LEQDPDVRVV AEAADGAQAY AIVAREKPDI LLMDISMPPG 
QSGLVACEKI AKDFPGTKVV ILTMFAEPEY LFYTLRGGAA GYVLKNSTSE ELIAAVHAVA
EGGSYIHPKM TAMLTKQLVA GGEEEDRSYQ QLSNRELEIL QLLAKGFTNK EISEQIFLSV
KTVEAHRSKI YQKLGLKTRA DLVDYALRHK LLNV