| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1671 |
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| Symbol | |
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| ID | 8415970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | - |
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| Start bp | 1971893 |
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| End bp | 1973407 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645024638 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_003182026 |
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| Protein GI | 257791420 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00077424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00974752 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCGAGA TTTCGAAGCG GTTGTTGCAG GGGACGTCGA AGCCCGCGGG CGCGCCCGCG
GCGCTCGTGT TGGAGGACGG CGCCGTGTTC CGCGGCACGT CGTGCGCGGC GGCGGGGGAG
GTGTTCGGCG AGATCTGCTT CAACACGTCG CTCGAGGGCT ACCTCGAGGT GATCACCGAC
CCGTCGTACG CGGGCCAGAT CGTGACGATG ACGTATCCCC AGATCGGAAA CTACGGCGTG
AACGTGGACG ACGCGCAGGC GGACGAGCCC GCCCTGCGCG GCCTCGTCGT GCGCGACCTG
TGCGCGACGC CGTCGAACTG GCGCAGCGCG CAGGGCCTGC CCGACTACCT GCGCGACCAC
GGCGTGGTGG CCGTCGAAGG GGTGGACACC CGCGCGCTCG TGCGCCATGT GCGCGACTGC
GGCGCACAAC GGGCCGTGCT GTCCACCGTC GACGTGGACG AGGCCAGCCT TCTGGCGAAA
GTGCGCGCGA GCGCATCCAT CGTCGGGCAG AACCTGGCCT CCACGGTGTC GTGCGCGCGT
CCGCGCCGCT TCTTGGCCGA CGACCTGCCG GCTTCGCAGG CGTTCGCGCT CGCCGCGCCT
CCCGAGCCGC GCTTCAAAGT GGTCGCCTAC GACTGCGGAG CGAAGCGCTC CATCCTCGAA
AACCTCGTGC GCGCCGGCTG CGGCGTGACC TGCGTGCCGT GGGACACCCC GGCGGCCGAG
GTGCTGACCA TGGCTCCCGA CGGCGTGTTC CTGTCGAACG GCCCGGGCGA CCCCGAGGCC
GTCGAGGGCA CGTACGCCCA GGTGGAGCAA CTGCTGGGGA AGGTGCCCGT GTTCGGCATC
TGCCTGGGGC ACCAGATGAT CGCCAAGGCG GCGGGCGCGG ATATCGAGAA GCTCAAGTTC
GGCCACCGCG GCGGCAACCA TCCCGTCATG AACCTGCGCA CGCGCCGCGT GGAGATCACC
GCGCAGAACC ACGGCTTCGG CCTCGTGTTC CCCAGCTTGG GCGCGCTCGT GCCGGAGCTG
TCGGCCGGCG TCTGCACGCA CGAGGACGAC CTGCGCTGCT GGGCGCGCCG CGGCGTCGCG
CCGGTGGTGC AAAACGAGCG CTTCGGACGC ATCCAGCTCA CGCACGTGAA CCTCAACGAC
GGCACGGCCG AGGGCGTCGC GTTCCTCGAT ATACCGGCGT TCTCCGTGCA GTACCACCCG
GAAGCCTCGC CGGGTCCTAC CGACGCCCAT TACCTGTTCG CTGCGTTCGC ACGGTTGATG
GATTCCGCCG TTCTGGCGAA CGGCGGCGTT GCCGACGCTG CGGCCGCGGC TGGCACCCCA
TCTTGCACTT CTGCTGCGGC TGGACGGACG GAAGTCCAGT CCAGCCTTGC ATCAGGGCAA
TCTGGGGCAC CAGCCGCGCC CTCGCTGACC TTGCCTGACC CGCGCGAATG TGCAAACTAC
CTCGACATCG ACATCGCCGA GGATCGCCTG GCCGGCTGGT CGTTCGCCGA AGTGAAGGAG
GCCTCCCATG CCTAA
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| Protein sequence | MSEISKRLLQ GTSKPAGAPA ALVLEDGAVF RGTSCAAAGE VFGEICFNTS LEGYLEVITD
PSYAGQIVTM TYPQIGNYGV NVDDAQADEP ALRGLVVRDL CATPSNWRSA QGLPDYLRDH
GVVAVEGVDT RALVRHVRDC GAQRAVLSTV DVDEASLLAK VRASASIVGQ NLASTVSCAR
PRRFLADDLP ASQAFALAAP PEPRFKVVAY DCGAKRSILE NLVRAGCGVT CVPWDTPAAE
VLTMAPDGVF LSNGPGDPEA VEGTYAQVEQ LLGKVPVFGI CLGHQMIAKA AGADIEKLKF
GHRGGNHPVM NLRTRRVEIT AQNHGFGLVF PSLGALVPEL SAGVCTHEDD LRCWARRGVA
PVVQNERFGR IQLTHVNLND GTAEGVAFLD IPAFSVQYHP EASPGPTDAH YLFAAFARLM
DSAVLANGGV ADAAAAAGTP SCTSAAAGRT EVQSSLASGQ SGAPAAPSLT LPDPRECANY
LDIDIAEDRL AGWSFAEVKE ASHA
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