| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1662 |
|---|
| Symbol | |
|---|
| ID | 8415961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1963621 |
|---|
| End bp | 1964346 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645024631 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_003182019 |
|---|
| Protein GI | 257791413 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000183413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000549225 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGTT CGTTCGAAGA GGTTCCCGCG CGCGATCGCG TGATCGTGGC GCTCGACTGC
GGCATCGAAG AGGCCTTCGA CCTCGCGGAC CAGCTGCAGG GCAAGGCGAC GTGGATGAAG
GTGGGAATGA CGCTGTTCTA CGCGAACGGC CCGGCCATCG TGTACGCGCT CAAGGAGCGC
GGCTTCAAGG TGTTCCTCGA CCTCAAGTTC CACGACATTC CGCACCAGGT GGAGGGCGCC
GCGTACGCCG CGGCCGGCAG CGGGGCCGAT ATGCTGACCA TGCACACGGT GGGCGGCGTC
GACATGATGG CTGCGGCGCA GAAGGGCGCC GAGCGCGCAG CGTCCGAGTA CGGTCACGAT
GCGCCGGCGA CGCTGGGAAT TACGGTTCTC ACCAGCATGA ACGATGCGGC TCTGGCCGAA
ACGGGCGTAA GCCGCGCCAT GGCCGACCAG GTGGTCGTGC TGGCCGAGCA GGCCAAGCGC
GCCGGCATCT CCGGCGTGGT GGCGTCTCCG AAGGAGGCTG CGCGTCTGCG CGAGATCCTG
GGTCCGGACG CCTACATCGT CACGCCGGGC GTGCGCCCTG CGGGCAGCGA TCGCGGCGAT
CAGAGCCGCG TGGCCACGCC TGCCCAGGCG TTCGCCAACG GTGCGTCGCA CATCGTCATC
GGGCGTCCCA TCACGCAGGC GGCCGATCCG GCGGCTGCAT TCGAGTCCAT CGCGGCCGAG
CTGTAG
|
|---|
| Protein sequence | MVSSFEEVPA RDRVIVALDC GIEEAFDLAD QLQGKATWMK VGMTLFYANG PAIVYALKER
GFKVFLDLKF HDIPHQVEGA AYAAAGSGAD MLTMHTVGGV DMMAAAQKGA ERAASEYGHD
APATLGITVL TSMNDAALAE TGVSRAMADQ VVVLAEQAKR AGISGVVASP KEAARLREIL
GPDAYIVTPG VRPAGSDRGD QSRVATPAQA FANGASHIVI GRPITQAADP AAAFESIAAE
L
|
|---|
| |