Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1662 |
Symbol | |
ID | 8415961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1963621 |
End bp | 1964346 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645024631 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_003182019 |
Protein GI | 257791413 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000183413 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000549225 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGAGTT CGTTCGAAGA GGTTCCCGCG CGCGATCGCG TGATCGTGGC GCTCGACTGC GGCATCGAAG AGGCCTTCGA CCTCGCGGAC CAGCTGCAGG GCAAGGCGAC GTGGATGAAG GTGGGAATGA CGCTGTTCTA CGCGAACGGC CCGGCCATCG TGTACGCGCT CAAGGAGCGC GGCTTCAAGG TGTTCCTCGA CCTCAAGTTC CACGACATTC CGCACCAGGT GGAGGGCGCC GCGTACGCCG CGGCCGGCAG CGGGGCCGAT ATGCTGACCA TGCACACGGT GGGCGGCGTC GACATGATGG CTGCGGCGCA GAAGGGCGCC GAGCGCGCAG CGTCCGAGTA CGGTCACGAT GCGCCGGCGA CGCTGGGAAT TACGGTTCTC ACCAGCATGA ACGATGCGGC TCTGGCCGAA ACGGGCGTAA GCCGCGCCAT GGCCGACCAG GTGGTCGTGC TGGCCGAGCA GGCCAAGCGC GCCGGCATCT CCGGCGTGGT GGCGTCTCCG AAGGAGGCTG CGCGTCTGCG CGAGATCCTG GGTCCGGACG CCTACATCGT CACGCCGGGC GTGCGCCCTG CGGGCAGCGA TCGCGGCGAT CAGAGCCGCG TGGCCACGCC TGCCCAGGCG TTCGCCAACG GTGCGTCGCA CATCGTCATC GGGCGTCCCA TCACGCAGGC GGCCGATCCG GCGGCTGCAT TCGAGTCCAT CGCGGCCGAG CTGTAG
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Protein sequence | MVSSFEEVPA RDRVIVALDC GIEEAFDLAD QLQGKATWMK VGMTLFYANG PAIVYALKER GFKVFLDLKF HDIPHQVEGA AYAAAGSGAD MLTMHTVGGV DMMAAAQKGA ERAASEYGHD APATLGITVL TSMNDAALAE TGVSRAMADQ VVVLAEQAKR AGISGVVASP KEAARLREIL GPDAYIVTPG VRPAGSDRGD QSRVATPAQA FANGASHIVI GRPITQAADP AAAFESIAAE L
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