Gene Elen_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1571 
Symbol 
ID8415870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1869165 
End bp1870034 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content62% 
IMG OID645024540 
Productrespiratory-chain NADH dehydrogenase subunit 1 
Protein accessionYP_003181928 
Protein GI257791322 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.165543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC TCTTCGCTCT TATCGGCACC CTCGTCTTCG CCATCGTCGC GCCGGTTCTG 
GGATGCCTGC TCGCCGGTCT CGACCGCAAG ATCTCGGCTC GTATGCAGGG TCGCGTGGGA
CCCCCGCTGT TGCAGCCGTA CTACGATGTC CGCAAGCTCA TCGAGAAGGA CAACGTGTCG
GTGAACTCCA CCGAGGGCAC CTACATCACG TGCGCCCTCG TGTTCACCCT CATCGCCGGC
GGCATCTTCT TCTCCGGCGG CAACCTGCTG ATGAGCGTGT TCGTGATCAC GCTGTCGGGC
CTGTTCTTCA TCGTGGCCGC GTACTCCACG CGCTCGCCGT ACGCCGAGAT CGGCGCGAAC
CGCGAGACGC TGCAGGTCAT GGCGTACGAG CCCATGGTGC TGTTCATGGC CGTGGCGTTC
TACATGGCGG CCGGAACCTT CAACTCCGCA GGCGTGTTCT TCCTCGACGC GCCCGTAGTG
ACCAATATCT GGCTCGTATT CCTGGGCTTT TTGTTCGTGC TCACCATCAA GCTGCGCAAG
TCGCCGTTCG ACCTGTCGTA CTCGCATCAT GCGCATCAGG AGATCGTCAA GGGCATCACC
ACCGAGATGA GCGGCAAGAC GCTGGCGAAG GTGGAGATCA TGCACTGGTG CGAGAACGTG
CTGTTCCTCG GCTGGACCGC GCTGTTCTTC CTTTGGGGCA ACCCGCTGTC CATCGTGCTG
GCGCTCGTGG TAGTGGTGCT CGTGTACTTC CTTGAGATCT GGATCGACAA CAACTTCGCT
CGCGTGAAGT GGCAGGCCCT GCTGGCATCG GCGTGGGGCG TGGCCCTCGT CGCGGGCGGC
GTGAACATCG CGTTCTTGGC CTACCTGTAA
 
Protein sequence
MTMLFALIGT LVFAIVAPVL GCLLAGLDRK ISARMQGRVG PPLLQPYYDV RKLIEKDNVS 
VNSTEGTYIT CALVFTLIAG GIFFSGGNLL MSVFVITLSG LFFIVAAYST RSPYAEIGAN
RETLQVMAYE PMVLFMAVAF YMAAGTFNSA GVFFLDAPVV TNIWLVFLGF LFVLTIKLRK
SPFDLSYSHH AHQEIVKGIT TEMSGKTLAK VEIMHWCENV LFLGWTALFF LWGNPLSIVL
ALVVVVLVYF LEIWIDNNFA RVKWQALLAS AWGVALVAGG VNIAFLAYL